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SCNpilot_cont_1000_p_scaffold_1589

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1589_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(128..931)
DNA (804bp) protein (268aa)
Alpha/beta hydrolase fold protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UFQ0_CELFN rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADG73009.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1589_2
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1090..2439)
DNA (1350bp) protein (450aa)
hypothetical protein; K07407 alpha-galactosidase [EC:3.2.1.22] rbh
Alpha-galactosidase n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L0K1_9ACTO rbh
Alpha-galactosidase {ECO:0000313|EMBL:EKX66294.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
SCNpilot_cont_1000_p_scaffold_1589_3
unknown

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comp(2533..2955)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1589_4
unknown

Not on your lists

comp(2952..3263)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1589_5
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3450..3716)
DNA (267bp) protein (89aa)
Cold shock domain-containing protein CspD n=1 Tax=Streptomyces sp. C RepID=D9VTE2_9ACTO
Cold-shock protein {ECO:0000313|EMBL:KIF01983.1}; TaxID=1571774 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
cold-shock DNA-binding domain protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_1000_p_scaffold_1589_6
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3885..4637
DNA (753bp) protein (251aa)
Silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
Silent information regulator protein Sir2 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A538_CELGA
Silent information regulator protein Sir2 {ECO:0000313|EMBL:AEI13282.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1589_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4755..5354
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H343_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47661.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1589_8
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5421..6125
DNA (705bp) protein (235aa)
Purine-nucleoside phosphorylase {ECO:0000256|SAAS:SAAS00035203}; EC=2.4.2.1 {ECO:0000256|SAAS:SAAS00035203};; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
purine-nucleoside phosphorylase; K03784 purine-nucleoside phosphorylase [EC:2.4.2.1]
Purine nucleoside phosphorylase n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3FIU5_9ACTO
SCNpilot_cont_1000_p_scaffold_1589_9
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6234..7088
DNA (855bp) protein (285aa)
Cof-like hydrolase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1P8_CELFA
Cof-like hydrolase; K07024
Cof-like hydrolase {ECO:0000313|EMBL:AEE47468.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1589_10
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7185..7709)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00031F1F19
Uncharacterized protein {ECO:0000313|EMBL:KGM15254.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
Appr-1-p processing protein
SCNpilot_cont_1000_p_scaffold_1589_11
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8438..8869)
DNA (432bp) protein (144aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A574_CELGA
SCNpilot_cont_1000_p_scaffold_1589_12
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8873..9256)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UL85_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG75967.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1589_13
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9253..9693)
DNA (441bp) protein (147aa)
Ribonuclease VapC n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FU14_ISOV2
PilT protein domain-containing protein
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_cont_1000_p_scaffold_1589_14
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9693..9956)
DNA (264bp) protein (88aa)
Prevent-host-death family protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C230_BEUC1
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ACQ81655.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_1000_p_scaffold_1589_15
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10070..11392)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000367C86D rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEG45387.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_cont_1000_p_scaffold_1589_16
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11389..12498)
DNA (1110bp) protein (370aa)
Folate-binding protein YgfZ n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1S0_CELFA
Folate-binding protein YgfZ {ECO:0000313|EMBL:KGM01906.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
folate-binding protein YgfZ; K06980
SCNpilot_cont_1000_p_scaffold_1589_17
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12495..13052)
DNA (558bp) protein (186aa)
UPF0678 fatty acid-binding protein-like protein Cfla_3087 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UL88_CELFN
hypothetical protein
UPF0678 fatty acid-binding protein-like protein Cfla_3087 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1589_18
unknown

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comp(13056..13163)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1589_19
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13199..13558
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FUG4_ISOV2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEG45391.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_cont_1000_p_scaffold_1589_20
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13599..14174)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A581_CELGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI13325.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1589_21
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14213..14689)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1S5_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47495.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1589_22
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14686..15414)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1S6_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47496.1}; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1589_23
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15530..16264
DNA (735bp) protein (245aa)
Putative two component transcriptional regulator, winged helix family n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1S7_CELFA rbh
putative two component transcriptional regulator, winged helix family rbh
Putative two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEE47497.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1589_24
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16261..17472)
DNA (1212bp) protein (404aa)
Alpha amylase catalytic region n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1P7_CELFA rbh
alpha amylase catalytic region rbh
Alpha amylase catalytic region {ECO:0000313|EMBL:AEE47467.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1589_25
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17634..18554
DNA (921bp) protein (307aa)
Alpha/beta hydrolase fold protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1S9_CELFA
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEE47499.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1589_26
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18544..19269)
DNA (726bp) protein (242aa)
endonuclease III; K10773 endonuclease III [EC:4.2.99.18] rbh
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Endonuclease III n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A586_CELGA rbh
SCNpilot_cont_1000_p_scaffold_1589_27
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19409..19822
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1T1_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47501.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1589_28
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19881..20555
DNA (675bp) protein (225aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UL96_CELFN
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KGM16761.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
Crp/Fnr family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1589_29
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20577..20762)
DNA (186bp) protein (62aa)
LysR family transcriptional regulator n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B4C820
LysR family transcriptional regulator {ECO:0000313|EMBL:KEP24129.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
endoribonuclease L-PSP family protein
Displaying 29 items

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