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SCNpilot_cont_1000_p_scaffold_1767

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1767_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..667
DNA (666bp) protein (222aa)
glutamate synthase (ferredoxin) (EC:1.4.7.1); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:AEE45941.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AEE45941.1};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Glutamate synthase (Ferredoxin) n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYF2_CELFA
SCNpilot_cont_1000_p_scaffold_1767_2
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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660..2126
DNA (1467bp) protein (489aa)
glutamate synthase, NADH/NADPH, small subunit; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14] rbh
Glutamate synthase, NADH/NADPH, small subunit n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYF3_CELFA rbh
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:AEE45942.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1767_3
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2257..3687
DNA (1431bp) protein (477aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Pyruvate kinase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF78_CELFN
SCNpilot_cont_1000_p_scaffold_1767_4
Bifidobacterium mongoliense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3747..3926)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI80275.1}; TaxID=1437603 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium mongoliense DSM 21395.;"
SCNpilot_cont_1000_p_scaffold_1767_5
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4053..5156)
DNA (1104bp) protein (368aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
PfkB domain protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UL11_CELFN
Sugar kinase {ECO:0000313|EMBL:KGM01871.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
SCNpilot_cont_1000_p_scaffold_1767_6
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5181..5834)
DNA (654bp) protein (218aa)
Ketohydroxyglutarate aldolase {ECO:0000313|EMBL:KGM01870.1}; EC=4.1.2.14 {ECO:0000313|EMBL:KGM01870.1};; EC=4.1.3.16 {ECO:0000313|EMBL:KGM01870.1};; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H136_CELFA
SCNpilot_cont_1000_p_scaffold_1767_7
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5838..7478)
DNA (1641bp) protein (547aa)
acetyltransferase n=1 Tax=Streptomyces chartreusis RepID=UPI000262D6AF rbh
LigA protein {ECO:0000313|EMBL:EFL20350.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
Acetyltransferase rbh
SCNpilot_cont_1000_p_scaffold_1767_8
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(7480..8244)
DNA (765bp) protein (255aa)
dehydrogenase with different specificities; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLD3_9MICO
Tax=RBG_13_Chloroflexi_68_17_curated
SCNpilot_cont_1000_p_scaffold_1767_9
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8241..9059)
DNA (819bp) protein (273aa)
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17); K01815 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BY11_BEUC1
SCNpilot_cont_1000_p_scaffold_1767_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9056..9943)
DNA (888bp) protein (296aa)
2-keto-4-pentenoatehydratase/2-oxohepta-3-ene-1, 7-dioic acid hydratase n=1 Tax=Microbacterium sp. TS-1 RepID=U2X980_9MICO
2-keto-4-pentenoatehydratase/2-oxohepta-3-ene-1, 7-dioic acid hydratase {ECO:0000313|EMBL:GAD33926.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
SCNpilot_cont_1000_p_scaffold_1767_11
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9954..11132)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLT2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD33927.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1767_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11214..11891)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L771_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH19668.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
flavodoxin reductase (ferredoxin-NADPH reductase) family 1
SCNpilot_cont_1000_p_scaffold_1767_13
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11897..12787)
DNA (891bp) protein (297aa)
ABC-type sugar transport system, permease component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE11_MICTS rbh
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEP74464.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_cont_1000_p_scaffold_1767_14
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12787..13728)
DNA (942bp) protein (314aa)
Sugar ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLD8_9MICO rbh
Sugar ABC transporter permease protein {ECO:0000313|EMBL:GAD33930.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_1767_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13841..15187)
DNA (1347bp) protein (449aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE09_MICTS rbh
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:BAJ75054.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_1767_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15245..17248)
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036779FF rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH19672.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1767_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17376..19145
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE07_MICTS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ75052.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying 17 items

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