ggKbase home page

SCNpilot_cont_1000_p_scaffold_1913

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1913_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

636..1304
DNA (669bp) protein (223aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5B9_CELGA
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADG73593.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1913_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1762..2472)
DNA (711bp) protein (237aa)
membrane protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B6B7B7
Cation efflux family protein {ECO:0000313|EMBL:KJL39031.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative Co/Zn/Cd cation transporter
SCNpilot_cont_1000_p_scaffold_1913_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2418..2774)
DNA (357bp) protein (119aa)
HTH-type transcriptional regulator CmtR n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3W4_LEIAQ
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFI77263.1}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
ctpR; ArsR DNA-binding transcription regulator
SCNpilot_cont_1000_p_scaffold_1913_4
Corynebacterium humireducens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2846..4120)
DNA (1275bp) protein (425aa)
MFS transporter n=1 Tax=Nocardiopsis potens RepID=UPI000349F8C6 rbh
Major facilitator transporter {ECO:0000313|EMBL:AJE32814.1}; TaxID=1223515 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium humireducens NBRC 106098 = DSM 45392.;"
major facilitator transporter rbh
SCNpilot_cont_1000_p_scaffold_1913_5
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4165..5343)
DNA (1179bp) protein (393aa)
iscS3; Cysteine desulfurase (EC:2.8.1.7) rbh
Cysteine desulfurase {ECO:0000313|EMBL:CCK28676.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CCK28676.1};; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
Cysteine desulfurase n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QX75_9ACTO rbh
SCNpilot_cont_1000_p_scaffold_1913_6
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5343..5681)
DNA (339bp) protein (113aa)
DsrE family protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBZ7_INTC7
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur
DsrE family protein {ECO:0000313|EMBL:ADU49537.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_p_scaffold_1913_7
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5720..6385
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Nocardiopsis kunsanensis RepID=UPI00034CEDD6
ArsR family transcriptional regulator {ECO:0000313|EMBL:EWT07134.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
ArsR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1913_8
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6554..7345)
DNA (792bp) protein (264aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V4_CELGA
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:AEI10671.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1913_9
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7359..7991)
DNA (633bp) protein (211aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V2_CELGA
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEI10669.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1913_10
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7988..8968)
DNA (981bp) protein (327aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V1_CELGA
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AEI10668.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1913_11
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8958..9260)
DNA (303bp) protein (101aa)
Glutaredoxin 2 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2V0_CELGA
glutaredoxin 2
Glutaredoxin 2 {ECO:0000313|EMBL:AEI10667.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1913_12
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9467..10150
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U9_CELGA
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEI10666.1}; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1913_13
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10147..11247
DNA (1101bp) protein (367aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U8_CELGA
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_1913_14
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11405..11641
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U4_CELGA
Uncharacterized protein {ECO:0000313|EMBL:EYR62782.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein; K08982 putative membrane protein
SCNpilot_cont_1000_p_scaffold_1913_15
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11641..11994
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U3_CELGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI10660.1}; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1913_16
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12205..12477
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M503_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EWT07746.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1913_17
[Brevibacterium] flavum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12474..12761
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WXC8_CORGT
Uncharacterized protein {ECO:0000313|EMBL:AKF28715.1}; TaxID=92706 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="[Brevibacterium] flavum.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1913_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12848..13078
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKU0_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82425.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_p_scaffold_1913_19
unknown

Not on your lists

13216..13629
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1913_20
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13758..16544
DNA (2787bp) protein (929aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Copper-translocating P-type ATPase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U2_CELGA rbh
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEI10659.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1913_21
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16571..16849
DNA (279bp) protein (93aa)
Regulated in copper repressor n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LNV4_9MICO
hypothetical protein
Regulated in copper repressor {ECO:0000313|EMBL:ERG63662.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
SCNpilot_cont_1000_p_scaffold_1913_22
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17024..17701
DNA (678bp) protein (226aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUH2_MODMB
Diacylglyceryl transferase {ECO:0000313|EMBL:EYR64507.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Displaying 22 items

View Taxonomy