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SCNpilot_cont_1000_p_scaffold_1943

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1943_1
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..313
DNA (312bp) protein (104aa)
Anti-sigma-K factor RskA n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6X500_9ACTO
Anti-sigma-K factor RskA {ECO:0000313|EMBL:GAB93844.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
SCNpilot_cont_1000_p_scaffold_1943_2
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(314..1126)
DNA (813bp) protein (271aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6G6_CELFA
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEE45599.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1943_3
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1287..1691
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FRS9_ISOV2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEG43930.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_cont_1000_p_scaffold_1943_4
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1935..2945
DNA (1011bp) protein (337aa)
Periplasmic binding protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCY9_CELFN rbh
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein rbh
Periplasmic binding protein {ECO:0000313|EMBL:ADG74326.1}; Flags: Precursor;; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1943_5
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2949..4169
DNA (1221bp) protein (407aa)
Transport system permease protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCY8_CELFN
transport system permease; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ADG74325.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1943_6
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4160..4984
DNA (825bp) protein (275aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCY7_CELFN
ABC transporter related protein {ECO:0000313|EMBL:ADG74324.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1943_7
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4981..5967
DNA (987bp) protein (329aa)
LPPG domain-containing protein containing protein; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] rbh
LPPG domain protein containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6F2_CELFA rbh
LPPG domain protein containing protein {ECO:0000313|EMBL:AEE45585.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1943_8
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6017..6736)
DNA (720bp) protein (240aa)
2-phospho-L-lactate guanylyltransferase CofC; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68]
2-phospho-L-lactate guanylyltransferase CofC n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A088_CELGA
2-phospho-L-lactate guanylyltransferase CofC {ECO:0000313|EMBL:AEI12652.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1943_9
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6882..8234)
DNA (1353bp) protein (451aa)
HNH endonuclease n=1 Tax=Glaciibacter superstes RepID=UPI0003B489DF
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AEG44750.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_cont_1000_p_scaffold_1943_10
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8415..8981
DNA (567bp) protein (189aa)
HhH-GPD family protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6F0_CELFA
Fe-S cluster assembly protein HesB {ECO:0000313|EMBL:KGM11985.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
HhH-GPD family protein
SCNpilot_cont_1000_p_scaffold_1943_11
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9221..10840
DNA (1620bp) protein (540aa)
Putative ABC transporter ATP-binding protein (EC:3.6.3.-) rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEV83653.1}; EC=3.6.3.- {ECO:0000313|EMBL:AEV83653.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Putative ABC transporter ATP-binding protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S566_ACTS5 rbh
SCNpilot_cont_1000_p_scaffold_1943_12
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10846..12033)
DNA (1188bp) protein (396aa)
glycoside hydrolase 3 domain protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] rbh
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Glycoside hydrolase family 3 domain protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A092_CELGA rbh
SCNpilot_cont_1000_p_scaffold_1943_13
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12197..12640)
DNA (444bp) protein (148aa)
Hypothetical membrane protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AVB7_RHOOB
Uncharacterized protein {ECO:0000313|EMBL:KGH45602.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1943_14
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12756..13133)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6E9_CELFA
hypothetical protein
UPF0145 protein Celf_1447 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1943_15
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13207..14004)
DNA (798bp) protein (266aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
F420-dependent oxidoreductase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCJ7_CELFN
F420-dependent oxidoreductase {ECO:0000313|EMBL:ADG74311.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1943_16
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14106..15110)
DNA (1005bp) protein (335aa)
F420-dependent oxidoreductase, G6PDH family n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6E3_CELFA
G6PDH family F420-dependent oxidoreductase
F420-dependent oxidoreductase, G6PDH family {ECO:0000313|EMBL:AEE45576.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1943_17
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15256..16953
DNA (1698bp) protein (566aa)
Major facilitator superfamily MFS_1 n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BWQ9_BEUC1 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACQ80725.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying 17 items

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