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SCNpilot_cont_1000_p_scaffold_8860

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_8860_1
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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20..1237
DNA (1218bp) protein (406aa)
isocitrate dehydrogenase, NADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
isocitrate dehydrogenase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002D748DB
SCNpilot_cont_1000_p_scaffold_8860_2
unknown

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comp(1319..1555)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_8860_3
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1741..2265
DNA (525bp) protein (175aa)
malate dehydrogenase (EC:1.1.1.37 1.1.1.82); K00024 malate dehydrogenase [EC:1.1.1.37]
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Malate dehydrogenase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZS1_BEUC1
SCNpilot_cont_1000_p_scaffold_8860_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2324..2596
DNA (273bp) protein (91aa)
UPF0235 protein Celf_1125 n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2N4_CELFA
hypothetical protein; K09131 hypothetical protein
UPF0235 protein Celf_1125 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_8860_5
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2873..4054
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000369E248 rbh
sugar ABC transporter; K10546 putative multiple sugar transport system substrate-binding protein rbh
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_p_scaffold_8860_6
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4138..5688
DNA (1551bp) protein (517aa)
ABC transporter related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UI57_CELFN rbh
ABC transporter; K10548 putative multiple sugar transport system ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADG75402.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_8860_7
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5685..6878
DNA (1194bp) protein (398aa)
Inner-membrane translocator n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UI56_CELFN rbh
inner-membrane translocator; K10547 putative multiple sugar transport system permease protein rbh
Inner-membrane translocator {ECO:0000313|EMBL:ADG75401.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_8860_8
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6958..8214
DNA (1257bp) protein (419aa)
ROK family protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2Y7_CELFA rbh
ROK family protein rbh
ROK family protein {ECO:0000313|EMBL:AEE47605.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_8860_9
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8281..9051
DNA (771bp) protein (257aa)
ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2Y8_CELFA
ABC transporter related protein {ECO:0000313|EMBL:AEE47606.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_8860_10
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9317..10444
DNA (1128bp) protein (376aa)
ABC transporter substrate-binding protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000370F7E3
putative sugar ABC transporter, substrate-binding protein; K10546 putative multiple sugar transport system substrate-binding protein
Putative sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AEI12814.1}; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_8860_11
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10563..11948
DNA (1386bp) protein (462aa)
xylose ABC transporter ATP-binding protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F1363B
ABC transporter; K10548 putative multiple sugar transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADG75407.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Displaying 11 items

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