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SCNpilot_cont_1000_p_scaffold_5316

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5316_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1276)
DNA (1275bp) protein (425aa)
Glycosyl transferase family 2 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHB5_CELFN
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADG75236.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_5316_2
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1252..2124)
DNA (873bp) protein (291aa)
Glycosyl transferase family 2 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHB5_CELFN
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADG75236.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_5316_3
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2213..2542)
DNA (330bp) protein (110aa)
transcription factor WhiB n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000361F300
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
SCNpilot_cont_1000_p_scaffold_5316_4
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2696..3427
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000372EB6B
Uncharacterized protein {ECO:0000313|EMBL:KGM00860.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5316_5
unknown

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comp(3399..3974)
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5316_6
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3923..5431)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3E280
hypothetical protein
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_cont_1000_p_scaffold_5316_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5638..6342
DNA (705bp) protein (235aa)
EchA3 n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTI7_9ACTO
Methyltransferase family protein {ECO:0000313|EMBL:EXG79874.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
type 11 methyltransferase
SCNpilot_cont_1000_p_scaffold_5316_8
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6470..7420)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003726A65
Uncharacterized protein {ECO:0000313|EMBL:KEP24639.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
hypothetical protein; K07027
SCNpilot_cont_1000_p_scaffold_5316_9
Actinobaculum sp. oral taxon 183, Actinobaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7457..8728)
DNA (1272bp) protein (424aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1RB63_9ACTO rbh
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ERH16868.1}; TaxID=1227261 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinobaculum.;" source="Actinobaculum sp. oral taxon 183 str. F0552.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5316_10
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8725..9669)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F521F1 rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADG75250.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_5316_11
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9970..11493
DNA (1524bp) protein (508aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHC5_CELFN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG75246.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_5316_12
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11533..12690)
DNA (1158bp) protein (386aa)
mannose-6-phosphate isomerase; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8] rbh
Mannose-6-phosphate isomerase, class I n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A0W3_CELGA rbh
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EYR64761.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_1000_p_scaffold_5316_13
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12719..13642
DNA (924bp) protein (308aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] rbh
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4E3_CELFA rbh
SCNpilot_cont_1000_p_scaffold_5316_14
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13847..14884
DNA (1038bp) protein (346aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0S5G2_RHOSR rbh
SCNpilot_cont_1000_p_scaffold_5316_15
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14881..15690
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00037DD57C
Uncharacterized protein {ECO:0000313|EMBL:KGJ72196.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
cell wall biogenesis glycosyltransferase
SCNpilot_cont_1000_p_scaffold_5316_16
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15680..16348
DNA (669bp) protein (223aa)
fcl; GDP-L-fucose synthase (EC:1.1.1.271); K02377 GDP-L-fucose synthase [EC:1.1.1.271]
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
GDP-L-fucose synthase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1BED1_RHOOB
Displaying 16 items

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