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SCNpilot_cont_1000_p_scaffold_5876

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5876_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..476)
DNA (474bp) protein (158aa)
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000256|RuleBase:RU362030}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362030};; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036AD9F9
methyltransferase
SCNpilot_cont_1000_p_scaffold_5876_2
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(619..1698)
DNA (1080bp) protein (360aa)
Cytochrome oxidase assembly n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE05_CELFN rbh
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 rbh
Cytochrome oxidase assembly {ECO:0000313|EMBL:ADG74563.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_5876_3
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1767..5102
DNA (3336bp) protein (1112aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003616946 rbh
winged helix family transcriptional regulator rbh
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACZ30381.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_1000_p_scaffold_5876_4
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5107..5913)
DNA (807bp) protein (269aa)
ABC-2 type transporter n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BRC7_XYLCX
ABC transporter; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_1000_p_scaffold_5876_5
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5910..6914)
DNA (1005bp) protein (335aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BRC8_XYLCX rbh
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein rbh
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:ACZ30383.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_1000_p_scaffold_5876_6
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6984..7208)
DNA (225bp) protein (75aa)
Putative ABC transporter permease protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UTN1_9MICO
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAB49089.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein
SCNpilot_cont_1000_p_scaffold_5876_7
unknown

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7406..7690
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5876_8
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7668..8591)
DNA (924bp) protein (308aa)
ABC transporter related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE07_CELFN
ABC transporter; K09687 antibiotic transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADG74565.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_5876_9
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8737..10605
DNA (1869bp) protein (623aa)
DNA-directed DNA polymerase; K02335 DNA polymerase I [EC:2.7.7.7] rbh
DNA-directed DNA polymerase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A0K0_CELGA rbh
DNA-directed DNA polymerase {ECO:0000313|EMBL:AEI12685.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_5876_10
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10750..11484
DNA (735bp) protein (245aa)
Putative transcriptional regulator n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE09_CELFN
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ADG74567.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_5876_11
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11481..11888
DNA (408bp) protein (136aa)
FeS assembly protein SufB n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H8E4_CELFA
Fe-S cluster assembly protein SufB {ECO:0000313|EMBL:KGM03026.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB
Displaying 11 items

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