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SCNpilot_cont_1000_p_scaffold_3869

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3869_1
unknown

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comp(2..244)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3869_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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670..2379
DNA (1710bp) protein (570aa)
metG; methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] rbh
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Methionine--tRNA ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8J4_PHEZH rbh
SCNpilot_cont_1000_p_scaffold_3869_3
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2380..3111)
DNA (732bp) protein (244aa)
arginyltransferase (EC:2.3.2.8); K00685 arginine-tRNA-protein transferase [EC:2.3.2.8]
Putative arginyl-tRNA--protein transferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGT2_BREDI
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_cont_1000_p_scaffold_3869_4
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3193..4128)
DNA (936bp) protein (312aa)
chemotaxis protein MotB n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039C85C9 rbh
Chemotaxis MotB protein {ECO:0000313|EMBL:EAP90883.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB rbh
SCNpilot_cont_1000_p_scaffold_3869_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4248..4724
DNA (477bp) protein (159aa)
Flavin reductase domain protein FMN-binding n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX62_PARL1
flavin reductase domain-containing protein
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:ABS64495.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_3869_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4786..6081)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D545_CAUCE rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ83525.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3869_7
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6373..6882
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D526AA
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:AHJ63975.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
MarR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_3869_8
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6886..8022
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003659B72
secretion protein HlyD family protein; K03543 multidrug resistance protein A
Secretion protein HlyD family protein {ECO:0000313|EMBL:ABQ31091.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_1000_p_scaffold_3869_9
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8043..9590
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000318DCB4
Multidrug resistance efflux pump EmrB/QacA {ECO:0000313|EMBL:GAN78804.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
SCNpilot_cont_1000_p_scaffold_3869_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9587..10273
DNA (687bp) protein (229aa)
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUM0_RHOP2
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:ABD08090.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
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