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SCNpilot_cont_1000_p_scaffold_10856

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_10856_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..571
DNA (570bp) protein (190aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
TatD family hydrolase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K067_9PROT
TatD family hydrolase {ECO:0000313|EMBL:EKE70925.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_1000_p_scaffold_10856_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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582..1406
DNA (825bp) protein (275aa)
Beta-lactamase-like protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXT9_PARL1 rbh
Beta-lactamase-like protein {ECO:0000313|EMBL:GAK46751.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
beta-lactamase-like protein; K06167 PhnP protein rbh
SCNpilot_cont_1000_p_scaffold_10856_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1434..1853
DNA (420bp) protein (140aa)
ComA n=1 Tax=Deinococcus wulumuqiensis RepID=UPI00034AE5C8
Putative thioesterase family protein {ECO:0000313|EMBL:KFC73034.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_10856_4
unknown

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comp(1873..2067)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_10856_5
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2325..3173
DNA (849bp) protein (283aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19); K04765 ATP diphosphatase [EC:3.6.1.8] rbh
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Citreicella sp. SE45 RepID=D0D2G9_9RHOB rbh
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EEX14940.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
SCNpilot_cont_1000_p_scaffold_10856_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3220..4506)
DNA (1287bp) protein (429aa)
GTPase HflX n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQ49_RHOCS
hflX; GTP-binding protein hflX; K03665 GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_1000_p_scaffold_10856_7
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4531..4779)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036B5510
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
SCNpilot_cont_1000_p_scaffold_10856_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4869..5744)
DNA (876bp) protein (292aa)
D-amino acid aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000372562B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_1000_p_scaffold_10856_9
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5785..7197)
DNA (1413bp) protein (471aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXV1_PARL1
Nitrogen regulation protein NtrX {ECO:0000313|EMBL:CDO61073.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
two component sigma-54 specific Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX
SCNpilot_cont_1000_p_scaffold_10856_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7166..7432)
DNA (267bp) protein (89aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
two-component system, sensor histidine kinase (EC:2.7.3.-); K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
Nitrogen regulation protein ntrY n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2K7_BREDI
Displaying 10 items

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