ggKbase home page

SCNpilot_cont_1000_p_scaffold_936

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_936_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_936_2
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104..1174)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036B6261 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP51454.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
integrase family protein rbh
SCNpilot_cont_1000_p_scaffold_936_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1176..1391)
DNA (216bp) protein (72aa)
Putative Excisionase n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NIA0_RALSL
Excisionase-like protein {ECO:0000313|EMBL:EZP51453.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
excisionase
SCNpilot_cont_1000_p_scaffold_936_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1590..1682)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W8B4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35938.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_1000_p_scaffold_936_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1679..2242)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2W9Z9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD36016.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_1000_p_scaffold_936_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2239..2463)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYL8_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34561.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_1000_p_scaffold_936_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2460..2639)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X7M8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35934.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_1000_p_scaffold_936_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2636..2845)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WT55_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35932.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_1000_p_scaffold_936_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2847..3179)
DNA (333bp) protein (111aa)
HNH endonuclease n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F2F0BD
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ABX36763.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_1000_p_scaffold_936_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3176..3454)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B8K5_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KEH14655.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_936_11
Pseudomonas sp. VLB120, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3457..3879)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VMG4_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ37999.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. VLB120.;"
SCNpilot_cont_1000_p_scaffold_936_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3876..4562)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WCK3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35930.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_936_13
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4562..6553)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C2F1_DELAS
Uncharacterized protein {ECO:0000313|EMBL:EZP56355.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_936_14
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6648..8990)
DNA (2343bp) protein (781aa)
C-5 cytosine-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
C-5 cytosine-specific DNA methylase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LSJ6_BURGS rbh
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:AEA65792.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
SCNpilot_cont_1000_p_scaffold_936_15
unknown

Not on your lists

comp(9091..9276)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_936_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9273..10175)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYB8_DELAS rbh
ParB-like nuclease domain protein {ECO:0000313|EMBL:KFJ11762.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_cont_1000_p_scaffold_936_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10172..10513)
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KEH09726.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_1000_p_scaffold_936_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10521..11300)
DNA (780bp) protein (260aa)
Recombination associated protein RdgC n=2 Tax=Delftia acidovorans RepID=S2X567_DELAC
Exonuclease, RdgC family protein {ECO:0000313|EMBL:KFJ13466.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
rdgC; recombination associated protein; K03554 recombination associated protein RdgC
SCNpilot_cont_1000_p_scaffold_936_19
unknown

Not on your lists

comp(11398..11490)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_936_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11490..11783)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW30_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KFJ11097.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_936_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11761..12030)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Comamonas testosteroni RepID=UPI0003629737
Uncharacterized protein {ECO:0000313|EMBL:KFJ11646.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_936_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13473..13715
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KFJ10393.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_1000_p_scaffold_936_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13712..14233)
DNA (522bp) protein (174aa)
Putative phage repressor n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J401_COMT2
Helix-turn-helix family protein {ECO:0000313|EMBL:KFJ09397.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
phage repressor
SCNpilot_cont_1000_p_scaffold_936_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14305..14580
DNA (276bp) protein (92aa)
Transcriptional regulator, XRE family n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J402_COMT2
Helix-turn-helix family protein {ECO:0000313|EMBL:KFJ09620.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
XRE family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_936_25
unknown

Not on your lists

comp(14577..14795)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_936_26
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14949..15407
DNA (459bp) protein (153aa)
Transcriptional regulator CII n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RRV4_COMTE
Putative Transcriptional regulator CII {ECO:0000313|EMBL:EZP51424.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
transcriptional regulator CII
SCNpilot_cont_1000_p_scaffold_936_27
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15404..16306
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TN07_ACIAC
Uncharacterized protein {ECO:0000313|EMBL:KEH09734.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_936_28
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16293..16955
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X581_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KGG82864.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_936_29
unknown

Not on your lists

16952..17500
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0002EDD311
SCNpilot_cont_1000_p_scaffold_936_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17497..17763
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WT16_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KFJ10317.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
Displaying items 1-30 of 69 in total

View Taxonomy