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SCNpilot_cont_1000_p_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_196_1
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..797
DNA (795bp) protein (265aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00036CB238 rbh
multi-sensor signal transduction multi-kinase
SCNpilot_cont_1000_p_scaffold_196_2
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

818..1909
DNA (1092bp) protein (364aa)
Two-component response regulator n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GMF3_9SPHI rbh
Two-component response regulator {ECO:0000313|EMBL:EOR92881.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
response regulator receiver sensor signal transduction histidine kinase rbh
SCNpilot_cont_1000_p_scaffold_196_3
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1918..2313
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002DF2232
Aerobic respiration control sensor protein ArcB {ECO:0000313|EMBL:KHJ39312.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
response regulator receiver
SCNpilot_cont_1000_p_scaffold_196_4
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2329..3129)
DNA (801bp) protein (267aa)
GumN family protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENS7_RUNSL
Uncharacterized protein {ECO:0000313|EMBL:AKD05591.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
GumN family protein; K09973 hypothetical protein
SCNpilot_cont_1000_p_scaffold_196_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3222..3944)
DNA (723bp) protein (241aa)
Zinc/iron permease n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAX5_CHIPD
zinc/iron permease
Zinc/iron permease {ECO:0000313|EMBL:ACU59347.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_196_6
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4118..4699
DNA (582bp) protein (194aa)
UPF0301 protein NiasoDRAFT_0083 n=1 Tax=Niabella soli DSM 19437 RepID=H1NRN3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ22919.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein; K07735 putative transcriptional regulator
SCNpilot_cont_1000_p_scaffold_196_7
unknown

Not on your lists

4762..5346
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_196_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5356..7188
DNA (1833bp) protein (611aa)
UvrABC system protein C n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFZ2_CHIPD
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_196_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7291..7704
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSQ6_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64505.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_196_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7763..9244
DNA (1482bp) protein (494aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] rbh
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSX9_CHIPD rbh
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ACU59018.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_196_11
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9320..9709)
DNA (390bp) protein (130aa)
Two-component response regulator n=1 Tax=Beggiatoa sp. PS RepID=A7C2Z6_9GAMM
Chemotaxis protein CheY {ECO:0000313|EMBL:KKD40038.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCNpilot_cont_1000_p_scaffold_196_12
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9702..11273)
DNA (1572bp) protein (524aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI00030961E7
PAS domain-containing protein
SCNpilot_cont_1000_p_scaffold_196_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11580..12854)
DNA (1275bp) protein (425aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM77_CHIPD rbh
MiaB-like tRNA modifying protein rbh
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ACU63982.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_196_14
Dokdonia donghaensis, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12952..13506
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AZN0_KROS4
Uncharacterized protein {ECO:0000313|EMBL:KGO07760.1}; TaxID=1300343 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia donghaensis DSW-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_196_15
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(13555..14418)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036B773E
Tax=GWE2_Bacteroidetes_29_8_curated
SCNpilot_cont_1000_p_scaffold_196_16
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(14486..15658)
DNA (1173bp) protein (391aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Pedobacter agri RepID=UPI00029AC6CE
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_cont_1000_p_scaffold_196_17
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16058..17980
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X875_FLACA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC59136.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_196_18
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18257..18844)
DNA (588bp) protein (196aa)
GNAT family acetyltransferase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6RZD9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65646.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
acetyltransferase, ribosomal protein N-acetylase
SCNpilot_cont_1000_p_scaffold_196_19
unknown

Not on your lists

comp(18918..19142)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_196_20
unknown

Not on your lists

comp(19154..19396)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_196_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19441..19830)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSQ6_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64505.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_196_22
unknown

Not on your lists

20006..20521
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_196_23
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(20581..22017)
DNA (1437bp) protein (479aa)
Lipoprotein, putative n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0B9_DICTD
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
SCNpilot_cont_1000_p_scaffold_196_24
unknown

Not on your lists

22178..23266
DNA (1089bp) protein (363aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_196_25
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23276..24454)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RV81_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ18819.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCNpilot_cont_1000_p_scaffold_196_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24640..25443)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PKA9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KIC95522.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_1000_p_scaffold_196_27
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25595..26041)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034AB1FB
DNA-binding protein {ECO:0000313|EMBL:AKD04976.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
cold-shock DNA-binding domain-containing protein
SCNpilot_cont_1000_p_scaffold_196_28
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26153..27289)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002E219CF rbh
Family 3 adenylate cyclase {ECO:0000313|EMBL:AHM60537.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
family 3 adenylate cyclase
SCNpilot_cont_1000_p_scaffold_196_29
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27292..27678)
DNA (387bp) protein (129aa)
Response regulator n=1 Tax=Lyngbya aestuarii BL J RepID=U7QKV0_9CYAN
Chemotaxis protein CheY {ECO:0000313|EMBL:KHD06316.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
response regulator receiver protein
SCNpilot_cont_1000_p_scaffold_196_30
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(27675..29237)
DNA (1563bp) protein (521aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PAS domain S-box n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WG07_9CYAN
PAS domain-containing protein
Displaying items 1-30 of 148 in total

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