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SCNpilot_cont_1000_p_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_300_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

62..973
DNA (912bp) protein (304aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F9E34
Peptidase U61 {ECO:0000313|EMBL:AHF16775.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_cont_1000_p_scaffold_300_2
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(974..1267)
DNA (294bp) protein (98aa)
Rhodanese domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S8Y0_PEDSD
Rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ADY53467.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_1000_p_scaffold_300_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1281..2276)
DNA (996bp) protein (332aa)
GTPase CgtA n=1 Tax=Segetibacter koreensis RepID=UPI0003825C4B
GTPase ObgE; K03979 GTP-binding protein
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_300_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2276..2857)
DNA (582bp) protein (194aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.
Adenylate kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJZ5_CHIPD
SCNpilot_cont_1000_p_scaffold_300_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3203..3796)
DNA (594bp) protein (198aa)
pseudouridine synthase; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Pseudouridine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PII6_CHIPD
SCNpilot_cont_1000_p_scaffold_300_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4114..4878)
DNA (765bp) protein (255aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL59_CHIPD
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACU58403.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_300_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4875..5885)
DNA (1011bp) protein (337aa)
von Willebrand factor type A n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL60_CHIPD rbh
von Willebrand factor type A; K07114 uncharacterized protein rbh
von Willebrand factor type A {ECO:0000313|EMBL:ACU58404.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_300_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6056..7093
DNA (1038bp) protein (346aa)
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; K01444 N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26] rbh
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase {ECO:0000313|EMBL:AEW00240.1}; EC=3.5.1.26 {ECO:0000313|EMBL:AEW00240.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P7_NIAKG rbh
SCNpilot_cont_1000_p_scaffold_300_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7097..7777
DNA (681bp) protein (227aa)
CutC family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P6_NIAKG
CutC family protein; K06201 copper homeostasis protein
CutC family protein {ECO:0000313|EMBL:AEW00239.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_300_10
unknown

Not on your lists

comp(7840..9102)
DNA (1263bp) protein (421aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_300_11
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9183..11447)
DNA (2265bp) protein (755aa)
Putative trimeric autotransporter adhesin n=1 Tax=Haemophilus influenzae F3031 RepID=E7A3U7_HAEIF
Putative trimeric autotransporter adhesin {ECO:0000313|EMBL:CBY80720.1}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
caaA2; trimeric autotransporter adhesin
SCNpilot_cont_1000_p_scaffold_300_12
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11452..12042)
DNA (591bp) protein (197aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUQ6_HALH1
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJF54038.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
SCNpilot_cont_1000_p_scaffold_300_13
unknown

Not on your lists

12233..13897
DNA (1665bp) protein (555aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_300_14
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13894..14949)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034CA9B6 rbh
Oxidoreductase {ECO:0000313|EMBL:AKD03948.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
oxidoreductase FAD-binding domain-containing protein; K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
SCNpilot_cont_1000_p_scaffold_300_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14985..15725)
DNA (741bp) protein (247aa)
ATPase involved in chromosome partitioning n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX64_SOLCM
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:KIC91075.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
chromosome partitioning ATPase
SCNpilot_cont_1000_p_scaffold_300_16
unknown

Not on your lists

comp(15798..17894)
DNA (2097bp) protein (699aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003769099 rbh
SCNpilot_cont_1000_p_scaffold_300_17
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17908..18924)
DNA (1017bp) protein (339aa)
methanol dehydrogenase regulatory protein MoxR; K03924 MoxR-like ATPase [EC:3.6.3.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036442A8 rbh
Methanol dehydrogenase regulatory protein MoxR {ECO:0000313|EMBL:AEF83062.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
SCNpilot_cont_1000_p_scaffold_300_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

18974..19534
DNA (561bp) protein (187aa)
Hypothetical lipoprotein id=2280727 bin=GWB2_Clostridiales_37_7 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_300_19
unknown

Not on your lists

comp(19542..20054)
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_300_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20071..21627)
DNA (1557bp) protein (519aa)
Response regulator receiver protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP66_NIAKG
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEW03184.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_300_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21846..22316
DNA (471bp) protein (157aa)
GNAT family acetyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI00037774FF
GNAT family acetyltransferase {ECO:0000313|EMBL:KIC89298.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
N-acetyltransferase GCN5
SCNpilot_cont_1000_p_scaffold_300_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

22381..24024
DNA (1644bp) protein (548aa)
Uncharacterized protein id=4158762 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_cont_1000_p_scaffold_300_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24063..24941)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THH0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02816.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_300_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24985..25863)
DNA (879bp) protein (293aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase; K00858 NAD+ kinase [EC:2.7.1.23]
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMK3_CHIPD
SCNpilot_cont_1000_p_scaffold_300_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

25997..27481
DNA (1485bp) protein (495aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
40-residue YVTN family beta-propeller repeat protein id=3365213 bin=GWA2_Ignavibacteriae_54_16_partial species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_cont_1000_p_scaffold_300_26
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27525..27863
DNA (339bp) protein (113aa)
Dihydroneopterin aldolase n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EEC5_9FLAO
Dihydroneopterin aldolase {ECO:0000313|EMBL:KFB01277.1}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrovimonas.;" source="Mangrovimonas yunxiaonensis.;"
SCNpilot_cont_1000_p_scaffold_300_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27860..30067)
DNA (2208bp) protein (736aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia;
phosphoribosylformylglycinamidine synthase II; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUB9_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_300_28
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30474..31130
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000360AAA0 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO27665.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_300_29
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31140..32168
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003705E09 rbh
ADP-ribose 1 {ECO:0000313|EMBL:GAO27664.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
Appr-1-p processing protein rbh
SCNpilot_cont_1000_p_scaffold_300_30
unknown

Not on your lists

comp(32244..32567)
DNA (324bp) protein (108aa)

This feature has no annotations

Displaying items 1-30 of 86 in total

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