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SCNpilot_cont_1000_p_scaffold_506

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_506_1
unknown

Not on your lists

3..272
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_506_2
unknown

Not on your lists

comp(281..550)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_506_3
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(579..1346)
DNA (768bp) protein (256aa)
hypothetical protein; K01816 hydroxypyruvate isomerase [EC:5.3.1.22] rbh
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ISP6_9BACT rbh
Xylose isomerase {ECO:0000313|EMBL:AHF90962.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_506_4
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(1363..2376)
DNA (1014bp) protein (338aa)
L-idonate 5-dehydrogenase (EC:1.1.1.264)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AVM3_9BACT rbh
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:EIP99064.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_506_5
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2508..3329
DNA (822bp) protein (274aa)
Transcriptional regulator, AraC family n=2 Tax=unclassified Opitutaceae RepID=H1ISP4_9BACT
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EIP99063.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
AraC family transcriptional regulator; K07720 two-component system, response regulator YesN
SCNpilot_cont_1000_p_scaffold_506_6
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3419..3898
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SMY0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD88875.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_506_7
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(4310..4603)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_506_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4666..11157)
DNA (6492bp) protein (2164aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZU3_STEMA
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:AEM50194.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
putative glycine-rich autotransporter protein
SCNpilot_cont_1000_p_scaffold_506_9
unknown

Not on your lists

comp(11326..11616)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_506_10
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11737..12477
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IXS7_9BACT
hypothetical protein
Tax=CG_Rhodof_03
SCNpilot_cont_1000_p_scaffold_506_11
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12491..14308)
DNA (1818bp) protein (606aa)
UPI0003CDE3BB related cluster n=1 Tax=unknown RepID=UPI0003CDE3BB
Phosphomannomutase {ECO:0000313|EMBL:ESW78831.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
outer membrane autotransporter barrel domain-containing protein
SCNpilot_cont_1000_p_scaffold_506_12
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14552..15928)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003762612
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY74712.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
SCNpilot_cont_1000_p_scaffold_506_13
unknown

Not on your lists

16075..16554
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_506_14
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16690..17349)
DNA (660bp) protein (220aa)
Uncharacterized protein id=4984284 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
Tax=GWF2_Lentisphaerae_45_14_curated
SCNpilot_cont_1000_p_scaffold_506_15
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(17354..19036)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AQU5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP97386.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_506_16
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(19033..20769)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AQU4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP97385.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_506_17
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(20872..21576)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AQU3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP97384.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_506_18
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(21626..23047)
DNA (1422bp) protein (474aa)
Alpha-galactosidase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IQW8_9BACT rbh
Glycoside hydrolase family 4 {ECO:0000313|EMBL:AHF90420.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
glycoside hydrolase family protein rbh
SCNpilot_cont_1000_p_scaffold_506_19
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

23128..23973
DNA (846bp) protein (282aa)
Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IQW7_9BACT
AraC family transcriptional regulator {ECO:0000313|EMBL:AHF90419.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_506_20
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

24259..24939
DNA (681bp) protein (227aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AY74_9BACT
hypothetical protein
Tax=BJP_IG2158_Planctomycetes_45_10
SCNpilot_cont_1000_p_scaffold_506_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

25230..26249
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6G1_9BACT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDY18070.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_506_22
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

26296..27525
DNA (1230bp) protein (410aa)
Putative haemagglutinin-like (Or adhesin-like) with a signal peptide and a putative subtilisin-like serine protease domain n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z0E7_BRASO
Uncharacterized protein {ECO:0000313|EMBL:AKC81757.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
hemagglutinin-like protein
SCNpilot_cont_1000_p_scaffold_506_23
unknown

Not on your lists

27595..28248
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_506_24
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

28274..30832
DNA (2559bp) protein (853aa)
Beta-1,4-xylanase id=3727828 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
carbohydrate-binding family 9
Tax=GWF2_Lentisphaerae_50_93_curated
SCNpilot_cont_1000_p_scaffold_506_25
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30829..31515
DNA (687bp) protein (229aa)
Lipolytic protein G-D-S-L family n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P5G3_STRVO
SGNH hydrolase {ECO:0000313|EMBL:EXU64032.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
G-D-S-L family lipolytic protein
SCNpilot_cont_1000_p_scaffold_506_26
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(31624..32706)
DNA (1083bp) protein (361aa)
Transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZX6_9BACT
Transcriptional regulator {ECO:0000313|EMBL:EIQ00568.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_506_27
unknown

Not on your lists

32819..33544
DNA (726bp) protein (242aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_506_28
unknown

Not on your lists

33568..34242
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_506_29
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

34235..35422
DNA (1188bp) protein (396aa)
ogl; oligogalacturonate lyase; K01730 oligogalacturonide lyase [EC:4.2.2.6]
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AVD4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP98975.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_506_30
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

35437..36099
DNA (663bp) protein (221aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AVD8_9BACT
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIP98979.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
Displaying items 1-30 of 59 in total

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