ggKbase home page

SCNpilot_cont_1000_p_scaffold_883

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_883_1
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..390
DNA (390bp) protein (130aa)
Glucose-1-phosphate cytidylyltransferase RfbF {ECO:0000313|EMBL:ELX11380.1}; EC=2.7.7.33 {ECO:0000313|EMBL:ELX11380.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
rfbF; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
Glucose-1-phosphate cytidylyltransferase RfbF n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PI94_9BURK
SCNpilot_cont_1000_p_scaffold_883_2
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

405..1499
DNA (1095bp) protein (365aa)
CDP-glucose 4,6-dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIP5_9BACT rbh
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKC82025.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
CDP-glucose 4,6-dehydratase rbh
SCNpilot_cont_1000_p_scaffold_883_3
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1527..3107
DNA (1581bp) protein (527aa)
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZQ6_9BACT rbh
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:EIQ00498.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_883_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3136..4359
DNA (1224bp) protein (408aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EDY17264.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EDY17264.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase [EC:5.4.99.9] rbh
UDP-galactopyranose mutase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8P2_9BACT rbh
SCNpilot_cont_1000_p_scaffold_883_5
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4376..5224
DNA (849bp) protein (283aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LB40_9CYAN rbh
Uncharacterized protein {ECO:0000313|EMBL:KEF40947.1}; TaxID=1496688 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
nucleoside-diphosphate-sugar epimerase
SCNpilot_cont_1000_p_scaffold_883_6
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5250..6338
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:KHJ39126.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SCNpilot_cont_1000_p_scaffold_883_7
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

6343..7860
DNA (1518bp) protein (506aa)
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KKR03798.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
Polysaccharide biosynthesis protein id=2253549 bin=GWB2_Proteobacteria_55_19 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
wzx; LPS biosynthesis flippase
SCNpilot_cont_1000_p_scaffold_883_8
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7871..8842
DNA (972bp) protein (324aa)
Glycosyltransferase family 11 n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VXV0_9BACE
Glycosyltransferase family 11 {ECO:0000313|EMBL:CCZ88371.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
alpha-1,2-fucosyltransferase
SCNpilot_cont_1000_p_scaffold_883_9
unknown

Not on your lists

comp(8820..9935)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B762D9
SCNpilot_cont_1000_p_scaffold_883_10
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9995..10876
DNA (882bp) protein (294aa)
Glycosyl transferase protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8ISF9_HERSS
glycosyl transferase family protein
Glycosyl transferase protein {ECO:0000313|EMBL:ADJ63503.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
SCNpilot_cont_1000_p_scaffold_883_11
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10873..11850
DNA (978bp) protein (326aa)
Glycosyl transferase group 1 n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PIY7_9CYAN
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY32502.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
SCNpilot_cont_1000_p_scaffold_883_12
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11873..13012
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2C003_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHQ02370.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
SCNpilot_cont_1000_p_scaffold_883_13
unknown

Not on your lists

13051..14538
DNA (1488bp) protein (496aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_883_14
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14548..15171
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A8M3_DEIPD
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_cont_1000_p_scaffold_883_15
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

15221..16423
DNA (1203bp) protein (401aa)
Putative glycosyltransferase ypjH id=1295756 bin=GWE1_T_denit_62_9 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyltransferase
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_cont_1000_p_scaffold_883_16
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16492..17352
DNA (861bp) protein (287aa)
Putative glycosyltransferase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TJG4_9CYAN
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AFY82266.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
SCNpilot_cont_1000_p_scaffold_883_17
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17369..18631
DNA (1263bp) protein (421aa)
Glycosyl transferase group 1 n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BHH3_9GAMM
group 1 glycosyl transferase
Tax=GWC2_Geobacteraceae_58_44_curated
SCNpilot_cont_1000_p_scaffold_883_18
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18670..19224
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000378DCEE
hypothetical protein
Tax=CG_Flavo_02
SCNpilot_cont_1000_p_scaffold_883_19
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19225..21513
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M5K7_9BACL rbh
Uncharacterized protein {ECO:0000313|EMBL:EST53886.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
group 1 glycosyl transferase
SCNpilot_cont_1000_p_scaffold_883_20
unknown

Not on your lists

21519..22199
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_883_21
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

22209..23537
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000379A53A
polysaccharide biosynthesis family protein
Tax=GWC2_Elusimicrobia_64_44_curated
SCNpilot_cont_1000_p_scaffold_883_22
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

23534..24688
DNA (1155bp) protein (385aa)
Glycosyltransferase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A6K1_DEIPD
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AFZ69513.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
SCNpilot_cont_1000_p_scaffold_883_23
unknown

Not on your lists

comp(24677..25873)
DNA (1197bp) protein (399aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_883_24
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25885..26391)
DNA (507bp) protein (169aa)
Acyltransferase n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0USW4_MYCVA
Acyltransferase {ECO:0000313|EMBL:EJZ05708.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
acyltransferase
SCNpilot_cont_1000_p_scaffold_883_25
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26493..27029)
DNA (537bp) protein (179aa)
Acyltransferase 3 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TU31_TISMK
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:AFK56269.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_1000_p_scaffold_883_26
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(27026..28276)
DNA (1251bp) protein (417aa)
Glycosyl transferase group 1 n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PPL0_9CYAN
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY34482.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
SCNpilot_cont_1000_p_scaffold_883_27
unknown

Not on your lists

comp(28440..29723)
DNA (1284bp) protein (428aa)
group 1 glycosyl transferase n=1 Tax=Pedobacter agri RepID=UPI00029AA951
SCNpilot_cont_1000_p_scaffold_883_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

29927..31837
DNA (1911bp) protein (637aa)
O-antigen polymerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAG7_9BACT
O-antigen polymerase {ECO:0000313|EMBL:EDY16628.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_883_29
unknown

Not on your lists

31879..33240
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744704
SCNpilot_cont_1000_p_scaffold_883_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

33304..34776
DNA (1473bp) protein (491aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:EDY16397.1}; EC=2.7.10.2 {ECO:0000313|EMBL:EDY16397.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
capsular polysaccharide biosynthesis protein (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB23_9BACT rbh
Displaying 30 items

View Taxonomy