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SCNpilot_cont_1000_p_scaffold_949

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_949_1
unknown

Not on your lists

3..164
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190..813
DNA (624bp) protein (208aa)
Transposase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F883_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EZO98142.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
integrase catalytic subunit; K07497 putative transposase
SCNpilot_cont_1000_p_scaffold_949_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

849..9518
DNA (8670bp) protein (2890aa)
Putative uncharacterized protein id=1868419 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cellobiose phosphorylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_1000_p_scaffold_949_4
unknown

Not on your lists

9550..9753
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_5
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

9808..10953
DNA (1146bp) protein (382aa)
Integrase family protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EID6_CORAD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADE54202.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
SCNpilot_cont_1000_p_scaffold_949_6
unknown

Not on your lists

comp(10965..11441)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_7
unknown

Not on your lists

comp(11532..12131)
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(12334..13143)
DNA (810bp) protein (270aa)
ion transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029ABFC7
ion transporter
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_949_9
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(13143..18416)
DNA (5274bp) protein (1758aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AWA7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EIP99298.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
DNA helicase related protein rbh
SCNpilot_cont_1000_p_scaffold_949_10
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18574..18888)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli E101 RepID=H1EAK3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KHN56280.1}; TaxID=554 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum (Erwinia carotovora).;"
SCNpilot_cont_1000_p_scaffold_949_11
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18900..24731)
DNA (5832bp) protein (1944aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZMU3_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC20515.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_949_12
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24728..25936)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L2M0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC20514.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_949_13
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25968..28667)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AWB2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EIP99303.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
DNA repair ATPase-like protein rbh
SCNpilot_cont_1000_p_scaffold_949_14
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(28664..29890)
DNA (1227bp) protein (409aa)
DNA repair exonuclease n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AWB3_9BACT rbh
DNA repair exonuclease {ECO:0000313|EMBL:EIP99304.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
metallophosphoesterase
SCNpilot_cont_1000_p_scaffold_949_15
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(30308..30574)
DNA (267bp) protein (89aa)
Putative transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ANP4_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:EIP96635.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_949_16
unknown

Not on your lists

30824..31279
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_17
unknown

Not on your lists

31476..32057
DNA (582bp) protein (194aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_18
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(32314..34503)
DNA (2190bp) protein (730aa)
Alpha-L-rhamnosidase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IWZ5_9BACT rbh
hypothetical protein rbh
Tax=CG_Elusi_05
SCNpilot_cont_1000_p_scaffold_949_19
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(34581..35363)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IVV9_9BACT
N-terminal cleavage protein {ECO:0000313|EMBL:AHF90517.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
prepilin-type N-terminal cleavage/methylation domain
SCNpilot_cont_1000_p_scaffold_949_20
unknown

Not on your lists

35975..36355
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_21
unknown

Not on your lists

36385..36516
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_22
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36513..37304)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00037242CF
MSM (Multiple sugar metabolism) operon regulatory protein {ECO:0000313|EMBL:GAE29400.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
DNA-binding domain-containing protein, AraC-type
SCNpilot_cont_1000_p_scaffold_949_23
unknown

Not on your lists

comp(37282..37800)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_949_24
unknown

Not on your lists

37850..38482
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AUK8_9BACT
SCNpilot_cont_1000_p_scaffold_949_25
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

38525..40417
DNA (1893bp) protein (631aa)
Putative pectin lyase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXV8_9BACT rbh
putative pectin lyase rbh
Putative pectin lyase {ECO:0000313|EMBL:CCW36343.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_cont_1000_p_scaffold_949_26
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

40507..42912
DNA (2406bp) protein (802aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRF2_OPITP
Putative large secreted protein {ECO:0000313|EMBL:AIE85092.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_949_27
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

42902..44692
DNA (1791bp) protein (597aa)
Beta-galactosidase {ECO:0000313|EMBL:KHF32843.1}; EC=3.2.1.23 {ECO:0000313|EMBL:KHF32843.1};; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
beta-galactosidase; K12308 beta-galactosidase [EC:3.2.1.23] rbh
Beta-galactosidase n=2 Tax=Paenibacillus RepID=F5LP71_9BACL rbh
SCNpilot_cont_1000_p_scaffold_949_28
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(44870..46036)
DNA (1167bp) protein (389aa)
Putative dehydrogenase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZH3_9BACT
Putative dehydrogenase {ECO:0000313|EMBL:EIQ00415.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
oxidoreductase family, NADbinding Rossmann fold domain containing protein
SCNpilot_cont_1000_p_scaffold_949_29
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

46071..47024
DNA (954bp) protein (318aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZH2_9BACT
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EIQ00414.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_949_30
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(47357..48130)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017465AE
Uncharacterized protein {ECO:0000313|EMBL:AHF93764.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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