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SCNpilot_cont_1000_p_scaffold_958

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_958_1
unknown

Not on your lists

3..110
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_958_2

Not on your lists

418..849
DNA (432bp) protein (144aa)
Acyl carrier protein n=1 Tax=uncultured microorganism RepID=K0J6N6_9ZZZZ
Acyl carrier protein {ECO:0000313|EMBL:BAM62596.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
SCNpilot_cont_1000_p_scaffold_958_3
unknown

Not on your lists

1033..1479
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_958_4
unknown

Not on your lists

1566..1853
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_958_5
unknown

Not on your lists

1862..2344
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_958_6
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2405..2794
DNA (390bp) protein (130aa)
Hypothetical acetyltransferase {ECO:0000313|EMBL:CAD77288.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAD77288.1};; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;"
Putative acetyltransferase n=2 Tax=Rhodopirellula baltica RepID=K5DJP5_RHOBT
SCNpilot_cont_1000_p_scaffold_958_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

2908..3906
DNA (999bp) protein (333aa)
Putative uncharacterized protein id=4370025 bin=GWF2_Lentisphaerae_50_93 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
hypothetical protein rbh
Tax=GWF2_Lentisphaerae_50_93_curated
SCNpilot_cont_1000_p_scaffold_958_8
unknown

Not on your lists

3908..4537
DNA (630bp) protein (210aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_958_9
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4543..5118
DNA (576bp) protein (192aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D9V7_LARHH
antibiotic biosynthesis monooxygenase; K09932 hypothetical protein
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ACO73070.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
SCNpilot_cont_1000_p_scaffold_958_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5119..5934)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUB8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22156.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_958_11
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5934..6911)
DNA (978bp) protein (326aa)
Sulfate-binding protein of ABC transporter n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JHQ1_9PSED
Thiosulfate transporter subunit {ECO:0000313|EMBL:KDP83352.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
sulfate ABC transporter substrate-binding protein; K02048 sulfate transport system substrate-binding protein
SCNpilot_cont_1000_p_scaffold_958_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6992..7954)
DNA (963bp) protein (321aa)
cysK; cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] rbh
cysteine synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744357 rbh
Tax=GWF2_Verrucomicrobia_62_7_curated
SCNpilot_cont_1000_p_scaffold_958_13
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8014..9678)
DNA (1665bp) protein (555aa)
Putative permease subfamily, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JI62_9BACT rbh
Putative permease subfamily, putative {ECO:0000313|EMBL:EDY83753.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
sulfate transporter; K03321 sulfate permease, SulP family
SCNpilot_cont_1000_p_scaffold_958_14
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9922..10938)
DNA (1017bp) protein (339aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K12957 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
alcohol dehydrogenase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E50 rbh
Zinc-containing alcohol dehydrogenase superfamily protein {ECO:0000313|EMBL:EAQ82521.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
SCNpilot_cont_1000_p_scaffold_958_15
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11059..12069)
DNA (1011bp) protein (337aa)
NADPH:quinone reductase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744FF8 rbh
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:EIQ01141.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
zinc-containing alcohol dehydrogenase superfamily protein
SCNpilot_cont_1000_p_scaffold_958_16
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12247..12987
DNA (741bp) protein (247aa)
Short chain dehydrogenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4S4_9SPHN
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KJV35335.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
short chain dehydrogenase
SCNpilot_cont_1000_p_scaffold_958_17
Pseudomonas sp. GM67, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13009..13983
DNA (975bp) protein (325aa)
lipase; K01066 esterase / lipase [EC:3.1.1.-] rbh
Esterase/lipase n=1 Tax=Pseudomonas sp. GM67 RepID=J2UVL5_9PSED rbh
Esterase/lipase {ECO:0000313|EMBL:EJM91249.1}; Flags: Precursor;; TaxID=1144335 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM67.;"
SCNpilot_cont_1000_p_scaffold_958_18
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14021..14614)
DNA (594bp) protein (198aa)
Two-component nodulation response regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JI32_AGRRK
Nodulation protein W {ECO:0000313|EMBL:KJF74842.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
nodW; two-component nodulation response regulator protein
SCNpilot_cont_1000_p_scaffold_958_19
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14644..15540)
DNA (897bp) protein (299aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
nodV2; nodulation protein NodV (EC:2.7.13.3)
histidine kinase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000369992C
SCNpilot_cont_1000_p_scaffold_958_20
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15522..16283)
DNA (762bp) protein (254aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACK71245.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACK71245.1};; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
signal transduction histidine kinase n=1 Tax=Schlesneria paludicola RepID=UPI00029B2363
SCNpilot_cont_1000_p_scaffold_958_21
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16294..17682)
DNA (1389bp) protein (463aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF66_9BACT rbh
Transcriptional regulatory protein zraR {ECO:0000313|EMBL:AKF04407.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
PAS/PAC sensor protein rbh
SCNpilot_cont_1000_p_scaffold_958_22
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17704..18105)
DNA (402bp) protein (134aa)
Response regulator receiver protein n=1 Tax=Burkholderia sp. H160 RepID=B5WH52_9BURK
Response regulator receiver protein {ECO:0000313|EMBL:EEA02303.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
response regulator receiver protein
SCNpilot_cont_1000_p_scaffold_958_23
unknown

Not on your lists

comp(18159..18359)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_958_24
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18517..19704)
DNA (1188bp) protein (396aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQU9_OPITP rbh
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein rbh
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:ACB77847.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_958_25
unknown

Not on your lists

comp(19761..20567)
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_958_26
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

20747..22444
DNA (1698bp) protein (566aa)
probable xanthan lyase id=3918288 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
hypothetical protein rbh
Tax=GWF2_Lentisphaerae_50_93_curated
SCNpilot_cont_1000_p_scaffold_958_27
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

22467..23849
DNA (1383bp) protein (461aa)
Carbohydrate-binding CenC domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IKL3_9BACT
Polysaccharide deacetylase {ECO:0000313|EMBL:AHF93425.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_958_28
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23949..25487
DNA (1539bp) protein (513aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y325_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03238.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_p_scaffold_958_29
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(25645..27471)
DNA (1827bp) protein (609aa)
PEP motif putative anchor domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUQ4_9BACT
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCNpilot_cont_1000_p_scaffold_958_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

27921..31703
DNA (3783bp) protein (1261aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746584
Uncharacterized protein {ECO:0000313|EMBL:EDY20458.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying items 1-30 of 41 in total

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