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SCNpilot_cont_1000_p_scaffold_990

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_990_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..1590
DNA (1590bp) protein (530aa)
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGZ1_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_990_2
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1650..2837
DNA (1188bp) protein (396aa)
acetylornithine and succinylornithine aminotransferase; K00818 acetylornithine aminotransferase [EC:2.6.1.11] rbh
Acetylornithine aminotransferase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQH0_AKKM8 rbh
Tax=GWF2_Verrucomicrobia_62_7_curated
SCNpilot_cont_1000_p_scaffold_990_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2907..3803
DNA (897bp) protein (299aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3] rbh
Ornithine carbamoyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW08_9BACT rbh
SCNpilot_cont_1000_p_scaffold_990_4
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3840..5444
DNA (1605bp) protein (535aa)
Putative Sensor protein {ECO:0000313|EMBL:CBN55247.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBN55247.1};; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
Putative Sensor protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FY07_9CYAN
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_cont_1000_p_scaffold_990_5
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5437..7224
DNA (1788bp) protein (596aa)
Sensory/regulatory protein RpfC {ECO:0000313|EMBL:EKB47497.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EKB47497.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
Sensory/regulatory protein RpfC n=1 Tax=Cecembia lonarensis LW9 RepID=K1L5Y2_9BACT
GAF sensor hybrid histidine kinase rbh
SCNpilot_cont_1000_p_scaffold_990_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7305..9410
DNA (2106bp) protein (702aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] rbh
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVZ9_9BACT rbh
SCNpilot_cont_1000_p_scaffold_990_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9458..9808)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17126.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_990_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(10006..11634)
DNA (1629bp) protein (543aa)
symporter n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744899 rbh
SSS family solute/sodium (Na+) symporter; K14393 cation/acetate symporter rbh
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ABJ81924.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_p_scaffold_990_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11674..12093)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744898
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81923.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_p_scaffold_990_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12119..13249)
DNA (1131bp) protein (377aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6I5_9BACT rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_990_11
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(13281..14120)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000373CAD7
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:AKC83543.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_990_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14254..14652
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Y1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18184.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_990_13
unknown

Not on your lists

14649..15083
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_990_14
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15080..15388
DNA (309bp) protein (103aa)
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_cont_1000_p_scaffold_990_15
unknown

Not on your lists

15401..15619
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_990_16
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15632..15922)
DNA (291bp) protein (97aa)
UPF0235 protein HMPREF9440_00008 n=1 Tax=Sutterella sp. CAG:397 RepID=R7C3H6_9BURK
hypothetical protein; K09131 hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_cont_1000_p_scaffold_990_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16053..17444
DNA (1392bp) protein (464aa)
Divalent metal cation transporter MntH n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTL7_9BACT rbh
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Manganese transport protein mntH rbh
SCNpilot_cont_1000_p_scaffold_990_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17453..17881
DNA (429bp) protein (143aa)
Universal stress protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBW1_9BACT
UspA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
SCNpilot_cont_1000_p_scaffold_990_19
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17933..18181
DNA (249bp) protein (83aa)
Prevent-host-death family protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6L4_9GAMM
Prevent-host-death family protein {ECO:0000313|EMBL:AHK78611.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
prevent-host-death family protein
SCNpilot_cont_1000_p_scaffold_990_20
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18178..18591
DNA (414bp) protein (138aa)
PilT protein domain protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZJ94_THASP
Toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:KIN90156.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
PilT protein domain-containing protein
SCNpilot_cont_1000_p_scaffold_990_21
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18656..20239)
DNA (1584bp) protein (528aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3) rbh
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Schlesneria paludicola RepID=UPI00029A8000 rbh
PAS domain S-box protein {ECO:0000313|EMBL:EKU79963.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
SCNpilot_cont_1000_p_scaffold_990_22
unknown

Not on your lists

comp(20472..20915)
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_990_23
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

21006..22187
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IQL7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF94555.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
AFR601Cp
SCNpilot_cont_1000_p_scaffold_990_24
unknown

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comp(22204..22551)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_990_25
unknown

Not on your lists

comp(22607..23740)
DNA (1134bp) protein (378aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_990_26
unknown

Not on your lists

comp(23801..24277)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_990_27
unknown

Not on your lists

24388..24996
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_990_28
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25468..26883)
DNA (1416bp) protein (472aa)
Major facilitator superfamily MFS_1 n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IW75_9BACT
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:EIQ00976.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_990_29
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(27016..28878)
DNA (1863bp) protein (621aa)
PEP motif putative anchor domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUQ4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF94414.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_990_30
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

29071..30408
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUQ7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF94417.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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