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SCNpilot_cont_1000_p_scaffold_2229

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2229_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2..628
DNA (627bp) protein (209aa)
Glutamate--ammonia ligase {ECO:0000313|EMBL:EDY17289.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDY17289.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
Glutamate--ammonia ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D896_9BACT
SCNpilot_cont_1000_p_scaffold_2229_2
Aeromonas diversa, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(744..2069)
DNA (1326bp) protein (442aa)
Alkaline phosphatase n=1 Tax=Aeromonas diversa 2478-85 RepID=N9TW49_9GAMM
Alkaline phosphatase {ECO:0000313|EMBL:ENY70349.1}; TaxID=1268237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas diversa 2478-85.;"
alkaline phosphatase lipoprotein transmembrane
SCNpilot_cont_1000_p_scaffold_2229_3
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2161..3180
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XVA1_9BACT
Inorganic phosphate transporter {ECO:0000313|EMBL:KGO33308.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
SCNpilot_cont_1000_p_scaffold_2229_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3240..3638
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20192.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2229_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3635..5518
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZM6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY20190.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_2229_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(5525..6130)
DNA (606bp) protein (202aa)
uracil-DNA glycosylase superfamily protein; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
Uracil-DNA glycosylase superfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWV1_OPITP
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ACB74230.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_2229_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6127..6678)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU51_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22089.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2229_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6729..7361
DNA (633bp) protein (211aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D044_9BACT
ErfK/YbiS/YcfS/YnhG family protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2229_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7489..8439)
DNA (951bp) protein (317aa)
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS3_9BACT
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2229_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8492..9424)
DNA (933bp) protein (311aa)
Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS1_9BACT rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDY20235.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_2229_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9483..10181
DNA (699bp) protein (233aa)
Alanine racemase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS0_9BACT
alanine racemase; K06997
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2229_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10178..10777)
DNA (600bp) protein (200aa)
peptidase S16 lon domain-containing protein; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Peptidase S16 lon domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMQ1_OPITP
Peptidase S16 lon domain protein {ECO:0000313|EMBL:ACB75329.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_2229_13
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10855..11577
DNA (723bp) protein (241aa)
Membrane protein {ECO:0000313|EMBL:KGO98393.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
Putative uncharacterized protein id=2750864 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2229_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11608..12699
DNA (1092bp) protein (364aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Radical SAM domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D717_9BACT rbh
Radical SAM domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_2229_15
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

12715..13707
DNA (993bp) protein (331aa)
Bile acid:sodium symporter n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ21_OPITP rbh
bile acid:sodium symporter; K14347 solute carrier family 10 (sodium/bile acid cotransporter), member 7 rbh
Bile acid:sodium symporter {ECO:0000313|EMBL:ACB77093.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_2229_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13743..14783
DNA (1041bp) protein (347aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R3_9BACT rbh
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EDY17121.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
metal dependent phosphohydrolase; K03698 CMP-binding protein
SCNpilot_cont_1000_p_scaffold_2229_17
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14909..15250)
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II-1 n=2 Tax=Neisseriaceae RepID=Q7NWE5_CHRVO
glnB; nitrogen regulatory protein P-II-1; K04751 nitrogen regulatory protein P-II 1
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:KJH66245.1}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
SCNpilot_cont_1000_p_scaffold_2229_18
unknown

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15354..15689
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying 18 items

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