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SCNpilot_cont_1000_p_scaffold_2549

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2549_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1..231
DNA (231bp) protein (77aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW51_9BACT
SCNpilot_cont_1000_p_scaffold_2549_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

228..845
DNA (618bp) protein (206aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
Phospholipid/glycerol acyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW50_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2549_3
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1144..3996
DNA (2853bp) protein (951aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00036460E3 rbh
multi-sensor signal transduction histidine kinase rbh
SCNpilot_cont_1000_p_scaffold_2549_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3993..5003)
DNA (1011bp) protein (337aa)
lipopolysaccharide heptosyltransferase III; K02849 heptosyltransferase III [EC:2.4.-.-]
lipopolysaccharide heptosyltransferase III, putative n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458EE
Glycosyl transferase family 9 {ECO:0000313|EMBL:EDY17123.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2549_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5000..6247)
DNA (1248bp) protein (416aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW8_9BACT rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY21288.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycosyl transferase
SCNpilot_cont_1000_p_scaffold_2549_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6256..7299
DNA (1044bp) protein (348aa)
group 1 glycosyl transferase; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R4_9BACT rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY17122.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2549_7
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(7364..7969)
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
isopropylmalate isomerase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745AA2
SCNpilot_cont_1000_p_scaffold_2549_8
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(7977..9386)
DNA (1410bp) protein (470aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PT24_MEIRD rbh
SCNpilot_cont_1000_p_scaffold_2549_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9582..10172
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18812.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2549_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10183..10827)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJF3_9GAMM
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_1000_p_scaffold_2549_11
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(10824..11795)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IHM3_PHYMF
hypothetical protein; K07027
Uncharacterized protein {ECO:0000313|EMBL:BAM04761.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
SCNpilot_cont_1000_p_scaffold_2549_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11888..12721
DNA (834bp) protein (278aa)
Acyltransferase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYJ7_9PROT
Acyltransferase {ECO:0000313|EMBL:EHM01896.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
phospholipid/glycerol acyltransferase
SCNpilot_cont_1000_p_scaffold_2549_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12784..13503
DNA (720bp) protein (240aa)
glycosyl transferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037761C2
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:AAZ98712.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_cont_1000_p_scaffold_2549_14
uncultured Xanthomonas sp., Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13479..14120
DNA (642bp) protein (214aa)
Polysaccharide deacetylase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HH69_XANCT
Polysacc_deac_1 {ECO:0000313|EMBL:AIA87320.1}; Flags: Fragment;; TaxID=152831 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; environmental samples.;" source="uncultured Xanthomonas sp.;"
acetylxylan esterase
SCNpilot_cont_1000_p_scaffold_2549_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14117..14878
DNA (762bp) protein (254aa)
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003691D21
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:EDY21701.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2549_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14875..15531
DNA (657bp) protein (219aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWB0_9BACT
Outer membrane lipoprotein carrier protein LolA {ECO:0000313|EMBL:EDY21702.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2549_17
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(15528..16127)
DNA (600bp) protein (200aa)
Peroxiredoxin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ8_CHLTF
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AEP11060.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SCNpilot_cont_1000_p_scaffold_2549_18
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16327..17787
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035C367C rbh
Glucose transport protein {ECO:0000313|EMBL:BAQ15944.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
glucose transporter rbh
SCNpilot_cont_1000_p_scaffold_2549_19
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17811..18779
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003778E98
Uncharacterized protein {ECO:0000313|EMBL:EOA06043.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2549_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18789..19649)
DNA (861bp) protein (287aa)
Periplasmic component of the Tol biopolymer transport system-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2L5_9BACT
Periplasmic component of the Tol biopolymer transport system-like protein {ECO:0000313|EMBL:EDY19455.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acylaminoacyl peptidase
SCNpilot_cont_1000_p_scaffold_2549_21
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


19795..21129
DNA (1335bp) protein (445aa)
grs1; glycyl-tRNA synthetase (class II); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] rbh
glycine-tRNA synthetase subunit beta n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037D1496 rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2549_22
unknown

Not on your lists

21159..21500
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2549_23
unknown

Not on your lists

21513..22181
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2549_24
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22178..23740
DNA (1563bp) protein (521aa)
Ammonium transporter n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZU49_DESOH rbh
ammonium transporter; K03320 ammonium transporter, Amt family rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
SCNpilot_cont_1000_p_scaffold_2549_25
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

23802..24245
DNA (444bp) protein (148aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
nucleoside diphosphate kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744DA5
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
Displaying 25 items

View Taxonomy