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SCNpilot_cont_1000_p_scaffold_2568

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2568_1
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.32); K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000363862D
SCNpilot_cont_1000_p_scaffold_2568_2
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

468..1313
DNA (846bp) protein (282aa)
Membrane associated serine protease, Rhomboid family n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DVQ9_METI4
glpG; membrane associated serine protease, Rhomboid family
Peptidase {ECO:0000313|EMBL:KIE59416.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
SCNpilot_cont_1000_p_scaffold_2568_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1361..2035
DNA (675bp) protein (225aa)
Integral membrane protein-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAY5_9BACT rbh
Integral membrane protein-like protein {ECO:0000313|EMBL:EDY16359.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2568_4
unknown

Not on your lists

comp(1963..2346)
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2568_5
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2348..2746
DNA (399bp) protein (133aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19); K04765 ATP diphosphatase [EC:3.6.1.8]
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HDY8_9RHIZ
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:ESZ55076.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
SCNpilot_cont_1000_p_scaffold_2568_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2772..3761
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4A8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18709.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2568_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4070..4789)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZZS1_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO20891.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_cont_1000_p_scaffold_2568_8
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4798..7212)
DNA (2415bp) protein (805aa)
N-6 DNA methylase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRF0_HYPDA
N-6 DNA methylase
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_cont_1000_p_scaffold_2568_9
unknown

Not on your lists

comp(7953..8498)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2568_10
unknown

Not on your lists

comp(8498..9097)
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2568_11
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

9286..9540
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPL3_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74532.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_2568_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

9747..9995
DNA (249bp) protein (83aa)
PilT protein domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPL4_OPITP
PilT domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ACB74533.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_2568_13
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10173..10463
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C0U6_ACAM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW26070.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
SCNpilot_cont_1000_p_scaffold_2568_14
unknown

Not on your lists

comp(10542..10754)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2568_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10916..11803)
DNA (888bp) protein (296aa)
Alpha/beta hydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAV9_9BACT rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EDY16431.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
alpha/beta hydrolase rbh
SCNpilot_cont_1000_p_scaffold_2568_16
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11816..13111)
DNA (1296bp) protein (432aa)
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4A7_9BACT rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2568_17
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13162..13686
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW41_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2568_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13739..14563
DNA (825bp) protein (275aa)
Peptidoglycan-binding LysM n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW40_9BACT
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EDY21632.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2568_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14571..15530
DNA (960bp) protein (320aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acetyl-CoA carboxylase, carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW39_9BACT rbh
SCNpilot_cont_1000_p_scaffold_2568_20
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

15929..16240
DNA (312bp) protein (104aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QE57_9CYAN
dipZ; cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AGY57206.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Displaying 20 items

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