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SCNpilot_cont_1000_p_scaffold_2690

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2690_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(30..1481)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9P6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY16827.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_2690_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1725..2297)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9P7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16828.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2690_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2501..4384
DNA (1884bp) protein (628aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBR5_9BACT rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme rbh
SCNpilot_cont_1000_p_scaffold_2690_4
unknown

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4797..5471
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_5
unknown

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5616..6326
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_6
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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6526..8229
DNA (1704bp) protein (568aa)
Putative pectin lyase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXV8_9BACT
putative pectin lyase
Putative pectin lyase {ECO:0000313|EMBL:CCW36343.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_cont_1000_p_scaffold_2690_7
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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8219..9004
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUF9_9BACT
N-terminal cleavage protein {ECO:0000313|EMBL:AHF91247.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
prepilin-type N-terminal cleavage / methylation domain
SCNpilot_cont_1000_p_scaffold_2690_8
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

9073..10164
DNA (1092bp) protein (364aa)
Putative uncharacterized protein id=3746937 bin=GWF2_Planctomycete_41_51 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Tax=GWF2_Planctomycetes_41_51_curated
SCNpilot_cont_1000_p_scaffold_2690_9
unknown

Not on your lists

10164..10325
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10438..10662
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B0X6_9BACT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
SCNpilot_cont_1000_p_scaffold_2690_11
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10751..10987
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000363C58B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE10916.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
SCNpilot_cont_1000_p_scaffold_2690_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11006..11767)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBN7_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25017.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
SCNpilot_cont_1000_p_scaffold_2690_13
unknown

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comp(11919..12416)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_14

Not on your lists

comp(12670..12966)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Neisseria shayeganii 871 RepID=G4CGD7_9NEIS
Marine sediment metagenome DNA, contig: S01H1_S03370 {ECO:0000313|EMBL:GAF91203.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_1000_p_scaffold_2690_15
unknown

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comp(13144..14253)
DNA (1110bp) protein (370aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_16
unknown

Not on your lists

14441..14971
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_17
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15029..15871)
DNA (843bp) protein (281aa)
lpxA; acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZF6_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2690_18
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16058..17071
DNA (1014bp) protein (338aa)
LysR family transcriptional regulator n=1 Tax=Fischerella muscicola RepID=UPI0002FA4BEE
LysR family transcriptional regulator {ECO:0000313|EMBL:AJS61489.1}; TaxID=1566358 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHBB 10380.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_2690_19
unknown

Not on your lists

17353..17991
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_20
unknown

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comp(18555..18887)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_21
unknown

Not on your lists

comp(19095..19640)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_22
Pseudoalteromonas sp. BSi20429, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19740..20165)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=U1IUR0_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:GAA68792.1}; TaxID=1097676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas sp. BSi20429.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2690_23
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

Not on your lists

comp(20222..21082)
DNA (861bp) protein (287aa)
Putative uncharacterized protein id=4177043 bin=GWF2_Lentisphaerae_38_69 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
Tax=GWF2_Lentisphaerae_38_69_curated
SCNpilot_cont_1000_p_scaffold_2690_24
unknown

Not on your lists

comp(21239..21571)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2690_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21882..22796
DNA (915bp) protein (305aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:EDY20708.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EDY20708.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cysE; Serine acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
serine acetyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745ABA rbh
SCNpilot_cont_1000_p_scaffold_2690_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22784..23935
DNA (1152bp) protein (384aa)
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7]
Aminotransferase class V n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ15_9BACT rbh
Aminotransferase class V {ECO:0000313|EMBL:EDY20706.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2690_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23935..24573
DNA (639bp) protein (213aa)
Aminotransferase class V n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ15_9BACT
Aminotransferase class V {ECO:0000313|EMBL:EDY20706.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2690_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

24900..26084
DNA (1185bp) protein (395aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVG2_9BACT rbh
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:EDY21404.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2690_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

26081..26755
DNA (675bp) protein (225aa)
acetate--CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetyl-CoA synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVG3_9BACT
Acetyl-CoA synthetase {ECO:0000313|EMBL:EDY21405.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2690_30
unknown

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26934..27341
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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