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SCNpilot_cont_1000_p_scaffold_2935

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2935_1
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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664..1260
DNA (597bp) protein (199aa)
protein hupE n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000381E0B7
hupE; hydrogenase/urease accessory protein; K03192 urease accessory protein
Tax=GWA2_Gallionellales_60_18_curated
SCNpilot_cont_1000_p_scaffold_2935_2
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1375..2673
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZMP9_TERRK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFL90517.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_1000_p_scaffold_2935_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2984..3694)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBZ1_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39726.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_2935_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3818..4237)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH74_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60709.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2935_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4480..6096)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VHP9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK47322.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_2935_6
unknown

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comp(6276..6752)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2935_7
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

7132..8088
DNA (957bp) protein (319aa)
Helix-turn-helix type 11 domain-containing protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZ47_9BACT
Transcriptional regulator {ECO:0000313|EMBL:AHF89920.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
helix-turn-helix type 11 domain-containing protein
SCNpilot_cont_1000_p_scaffold_2935_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

8187..8567
DNA (381bp) protein (127aa)
glyoxalase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017450EF
glyoxalase/bleomycin resistance protein/dioxygenase; K06996
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACB75553.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_2935_9
unknown

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comp(8656..9522)
DNA (867bp) protein (289aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2935_10
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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9699..10721
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLZ7_9BACT
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_2935_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

10792..11379
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IXD0_9BACT
Type II secretion protein {ECO:0000313|EMBL:AHF89369.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
prepilin-type N-terminal cleavage / methylation domain
SCNpilot_cont_1000_p_scaffold_2935_12
unknown

Not on your lists

11395..12231
DNA (837bp) protein (279aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2935_13
unknown

Not on your lists

12242..12595
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2935_14
unknown

Not on your lists

12645..15236
DNA (2592bp) protein (864aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036535F9
SCNpilot_cont_1000_p_scaffold_2935_15
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(15435..15905)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037F8D64
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Displaying 15 items

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