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SCNpilot_cont_1000_p_scaffold_3311

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3311_1
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..148)
DNA (147bp) protein (49aa)
glutamate--ammonia ligase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
Glutamine synthetase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQS7_METS4
SCNpilot_cont_1000_p_scaffold_3311_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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346..819
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D895_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17288.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Mn2+-dependent serine/threonine protein kinase
SCNpilot_cont_1000_p_scaffold_3311_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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809..1576
DNA (768bp) protein (256aa)
protein serine/threonine phosphatase; K01090 protein phosphatase [EC:3.1.3.16]
Protein serine/threonine phosphatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D894_9BACT rbh
Protein serine/threonine phosphatase {ECO:0000313|EMBL:EDY17287.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_3311_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1573..2979)
DNA (1407bp) protein (469aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWD2_9BACT rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EDY21724.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sugar transport protein
SCNpilot_cont_1000_p_scaffold_3311_5
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(3078..3875)
DNA (798bp) protein (266aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) rbh
Ureidoglycolate lyase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILZ6_9BACT
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:AHF92761.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_3311_6
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(3973..5058)
DNA (1086bp) protein (362aa)
Alanine racemase domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILZ8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF94710.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
Alanine racemase, N-terminal domain family
SCNpilot_cont_1000_p_scaffold_3311_7

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5152..5652
DNA (501bp) protein (167aa)
Nucleoside 2-deoxyribosyltransferase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SL28_RHOPH
Marine sediment metagenome DNA, contig: S01H1_S30841 {ECO:0000313|EMBL:GAG34720.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Nucleoside 2-deoxyribosyltransferase
SCNpilot_cont_1000_p_scaffold_3311_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5653..6651)
DNA (999bp) protein (333aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46] rbh
Deoxyhypusine synthase n=1 Tax=mine drainage metagenome RepID=E6QHW5_9ZZZZ rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3311_9
unknown

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6918..7484
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3311_10
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

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comp(9333..10343)
DNA (1011bp) protein (337aa)
2-hydroxyacid-family dehydrogenase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPW5_9BACT rbh
2-hydroxyacid-family dehydrogenase {ECO:0000313|EMBL:EDM26410.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
phosphoglycerate dehydrogenase-like oxidoreductase
SCNpilot_cont_1000_p_scaffold_3311_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10362..10904)
DNA (543bp) protein (181aa)
Carbohydrate-binding CenC domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IWJ6_9BACT
Heparinase {ECO:0000313|EMBL:AHF89122.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_3311_12
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(10910..11530)
DNA (621bp) protein (207aa)
alpha-mannosidase (EC:3.2.1.24)
Alpha-mannosidase {ECO:0000313|EMBL:BAM03293.1}; EC=3.2.1.24 {ECO:0000313|EMBL:BAM03293.1};; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Alpha-mannosidase n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IDF5_PHYMF
SCNpilot_cont_1000_p_scaffold_3311_13
unknown

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11723..14005
DNA (2283bp) protein (761aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3311_14
unknown

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comp(14035..14754)
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3311_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(14751..18278)
DNA (3528bp) protein (1176aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYS3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20614.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_3311_16
unknown

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comp(18275..18622)
DNA (348bp) protein (116aa)

This feature has no annotations

Displaying 16 items

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