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SCNpilot_cont_1000_p_scaffold_3694

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3694_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205..906)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003801752
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_1000_p_scaffold_3694_2
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1265..2092)
DNA (828bp) protein (276aa)
Putative uncharacterized protein id=2162486 bin=GWE2_Gallionellales_58_10 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
SCNpilot_cont_1000_p_scaffold_3694_3
unknown

Not on your lists

2155..2781
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3273..4499)
DNA (1227bp) protein (409aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D524_9BACT rbh
DEAD/DEAH box helicase rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3694_5
unknown

Not on your lists

4626..4955
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5155..5628)
DNA (474bp) protein (158aa)
ferritin n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174491A
ferritin Dps family protein; K04047 starvation-inducible DNA-binding protein
Ferritin Dps family protein {ECO:0000313|EMBL:ACB77830.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_3694_7
Pseudoalteromonas spongiae, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5713..5916
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M324_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG51797.1}; TaxID=1117319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas spongiae UST010723-006.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3694_8
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

5950..6432
DNA (483bp) protein (161aa)
Hypothetical membrane protein id=2618904 bin=GWA2_Bacteroidetes_42_15 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_13_Chloroflexi_66_10_curated
SCNpilot_cont_1000_p_scaffold_3694_9
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6572..6946
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003770010
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJR36160.1}; TaxID=670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus.;"
SCNpilot_cont_1000_p_scaffold_3694_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7029..8414
DNA (1386bp) protein (462aa)
Nucleoside recognition domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D368_9BACT rbh
Nucleoside recognition domain protein {ECO:0000313|EMBL:EDY19179.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nucleoside recognition domain protein rbh
SCNpilot_cont_1000_p_scaffold_3694_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8423..9376
DNA (954bp) protein (318aa)
Auxin Efflux Carrier n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ09_9BACT
Auxin Efflux Carrier {ECO:0000313|EMBL:EDY20700.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
auxin efflux carrier; K07088
SCNpilot_cont_1000_p_scaffold_3694_12
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9373..10074)
DNA (702bp) protein (234aa)
4'-phosphopantetheinyl transferase n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V7F7_9CYAN
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:KIF28827.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
4'-phosphopantetheinyl transferase
SCNpilot_cont_1000_p_scaffold_3694_13
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

10134..10523
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DZQ3_METI4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD84238.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
SCNpilot_cont_1000_p_scaffold_3694_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10544..11278)
DNA (735bp) protein (245aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6A4_9BACT
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EDY18013.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cof; HAD superfamily hydrolase; K07024
SCNpilot_cont_1000_p_scaffold_3694_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11296..11655
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59837.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_3694_16

Not on your lists

11997..12476
DNA (480bp) protein (160aa)
Putative Histidinol-phosphatase {ECO:0000313|EMBL:CBH75449.1}; EC=3.1.3.15 {ECO:0000313|EMBL:CBH75449.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Histidinol-phosphatase n=1 Tax=mine drainage metagenome RepID=E6PG61_9ZZZZ
tRNA nucleotidyltransferase/poly(A) polymerase family protein
SCNpilot_cont_1000_p_scaffold_3694_17
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(12536..13093)
DNA (558bp) protein (186aa)
LemA-like protein n=1 Tax=uncultured bacterium RepID=K2FU20_9BACT
LemA family protein; K03744 LemA protein
Tax=RBG_13_Planctomycetes_60_9_curated
SCNpilot_cont_1000_p_scaffold_3694_18
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(13090..13773)
DNA (684bp) protein (228aa)
Putative uncharacterized protein id=4312365 bin=GWF2_Planctomycetes_50_10 species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_13_Planctomycetes_44_8b_curated
SCNpilot_cont_1000_p_scaffold_3694_19
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14509..15372)
DNA (864bp) protein (288aa)
Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus (strain HTA426) RepID=Q5L3N8_GEOKA
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:BAD74442.1}; TaxID=235909 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus kaustophilus (strain HTA426).;"
SCNpilot_cont_1000_p_scaffold_3694_20
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(15362..16618)
DNA (1257bp) protein (419aa)
Integrase, catalytic region n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NXL4_9DELT
integrase catalytic subunit
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
SCNpilot_cont_1000_p_scaffold_3694_21
unknown

Not on your lists

comp(16699..17250)
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_22
unknown

Not on your lists

17669..18004
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_23
unknown

Not on your lists

17994..18539
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037FA716
SCNpilot_cont_1000_p_scaffold_3694_24
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

comp(18708..19121)
DNA (414bp) protein (138aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Marinobacter RepID=A1TX84_MARAV
Two component system sensor histidine kinase, hybrid {ECO:0000313|EMBL:KJJ85991.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
SCNpilot_cont_1000_p_scaffold_3694_25
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(19133..19651)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K0U2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIE58919.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3694_26
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19663..19938)
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU65_9BACT
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3694_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20093..20419
DNA (327bp) protein (109aa)
phnA; putative phosphonoacetate hydrolase (EC:3.11.1.2); K06193 phosphonoacetate hydrolase [EC:3.11.1.2]
Alkylphosphonate utilization operon protein PhnA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPC3_9BACT
Alkylphosphonate utilization operon protein PhnA {ECO:0000313|EMBL:EEF58263.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_3694_28
unknown

Not on your lists

20432..20695
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_29
unknown

Not on your lists

comp(20692..21150)
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_30
unknown

Not on your lists

21453..21914
DNA (462bp) protein (154aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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