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SCNpilot_cont_1000_p_scaffold_3732

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3732_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3..1445
DNA (1443bp) protein (481aa)
msbA; lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-); K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D206_9BACT rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3732_2
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1449..2327)
DNA (879bp) protein (293aa)
Restriction endonuclease n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SG25_GALCS
Probable transmembrane protein {ECO:0000313|EMBL:CQB46690.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
restriction endonuclease; K07448 restriction system protein
SCNpilot_cont_1000_p_scaffold_3732_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2406..2984)
DNA (579bp) protein (193aa)
FKBP-type peptidyl-prolyl cis-trans isomerase slyD; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Aeromonas veronii RepID=F4DAY5_AERVB
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3732_4
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(3014..3451)
DNA (438bp) protein (146aa)
Putative membrane protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B3C5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHF93172.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein; K08976 putative membrane protein
SCNpilot_cont_1000_p_scaffold_3732_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3614..4288)
DNA (675bp) protein (225aa)
Cu2+-binding oxygen sensor (SCO1/SenC/PrrC family) n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DX78_METI4
Cu2+-binding oxygen sensor (SCO1/SenC/PrrC family); K07152
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3732_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4385..5275)
DNA (891bp) protein (297aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST7_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3732_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5272..6474)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI0003828441
ctaA; Heme A synthase, cytochrome oxidase biogenesis protein CtaA; K02259 cytochrome c oxidase assembly protein subunit 15
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3732_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6588..7871)
DNA (1284bp) protein (428aa)
Cytochrome c class I n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QYL7_ISOPI
class I cytochrome c
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3732_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(7868..9262)
DNA (1395bp) protein (465aa)
cytochrome-c oxidase; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome-c oxidase id=3658513 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_3732_10
unknown

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comp(9259..9630)
DNA (372bp) protein (124aa)
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3732_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(9630..10811)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZY4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY20298.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3732_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10808..11500)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZY3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20297.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cccA; cytochrome C
SCNpilot_cont_1000_p_scaffold_3732_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11504..12064)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20296.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3732_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12064..13467)
DNA (1404bp) protein (468aa)
polysulfide reductase NrfD; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] rbh
Polysulphide reductase NrfD n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZY1_9BACT rbh
Polysulphide reductase NrfD {ECO:0000313|EMBL:EDY20295.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_3732_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13470..16622)
DNA (3153bp) protein (1051aa)
Fe-S-cluster-containing hydrogenase components 1-like protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] rbh
Molybdopterin oxidoreductase, iron-sulfur binding subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZY0_9BACT rbh
Molybdopterin oxidoreductase, iron-sulfur binding subunit {ECO:0000313|EMBL:EDY20294.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_3732_16
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16619..17284)
DNA (666bp) protein (222aa)
Cytochrome c3 n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JZ60_9BACT
cytochrome c3
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3732_17
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17418..17840
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4P1Y5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJO27712.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
hypothetical protein
Displaying 17 items

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