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SCNpilot_cont_1000_p_scaffold_1046

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1046_1
unknown

Not on your lists

comp(1..426)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1046_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

717..1382
DNA (666bp) protein (222aa)
Type II secretory pathway pseudopilin PulG-like protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIL5_9BACT
Type II secretory pathway pseudopilin PulG-like protein {ECO:0000313|EMBL:EEF60278.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_1046_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1643..2323)
DNA (681bp) protein (227aa)
phosphate uptake regulator, PhoU n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E5D
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1046_4
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

comp(2377..3204)
DNA (828bp) protein (276aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
ATP-binding component of ABC phosphate transporter n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DFF7_9BACT rbh
SCNpilot_cont_1000_p_scaffold_1046_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3223..4119)
DNA (897bp) protein (299aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=Pseudomonas putida S610 RepID=V6J2A0_PSEPU rbh
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EST13940.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
phosphate ABC transporter permease; K02038 phosphate transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_1046_6
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4125..5093)
DNA (969bp) protein (323aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QBG6_9NOSO rbh
phosphate ABC transporter membrane protein rbh
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:AFY43000.1}; Flags: Precursor;; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
SCNpilot_cont_1000_p_scaffold_1046_7
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5123..6130)
DNA (1008bp) protein (336aa)
Phosphate-binding protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RX83_SYNP3 rbh
phosphate ABC transporter substrate-binding protein rbh
Phosphate-binding protein {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
SCNpilot_cont_1000_p_scaffold_1046_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6359..7129
DNA (771bp) protein (257aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
Superoxide dismutase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WGH8_9CYAN
superoxide dismutase
SCNpilot_cont_1000_p_scaffold_1046_9
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7529..8908)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000368A063 rbh
DNA polymerase V {ECO:0000313|EMBL:KIX22185.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
hypothetical protein; K09760 DNA recombination protein RmuC
SCNpilot_cont_1000_p_scaffold_1046_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8967..9629)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D881_9BACT
wecD; Acetyltransferase, GNAT family
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1046_11
unknown

Not on your lists

9665..10072
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1046_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10074..11246)
DNA (1173bp) protein (391aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D879_9BACT rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY17272.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rfaG; glycosyltransferase rbh
SCNpilot_cont_1000_p_scaffold_1046_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11277..12197)
DNA (921bp) protein (307aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Thioredoxin reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8X6_9BACT rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1046_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12243..13790)
DNA (1548bp) protein (516aa)
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family id=4527525 bin=GWC2_Methylomirabilis_70_16 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
arnT; 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family
Tax=GWC2_Rokubacteria_70_16_curated
SCNpilot_cont_1000_p_scaffold_1046_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13916..14374)
DNA (459bp) protein (153aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
thioesterase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745ED6
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1046_16
unknown

Not on your lists

comp(14379..15764)
DNA (1386bp) protein (462aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1046_17

Not on your lists

comp(15855..16763)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J339_9GAMM
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48360.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_cont_1000_p_scaffold_1046_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16914..17534
DNA (621bp) protein (207aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F5_9BACT
ABC transporter; K02003 putative ABC transport system ATP-binding protein
SCNpilot_cont_1000_p_scaffold_1046_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17561..20011
DNA (2451bp) protein (817aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D235_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY19275.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1046_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


comp(20015..20254)
DNA (240bp) protein (80aa)
Ribosomal protein S18 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0A3_9BACT
Ribosomal protein S18 {ECO:0000313|EMBL:EDY20417.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
SCNpilot_cont_1000_p_scaffold_1046_21
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(20261..20434)
DNA (174bp) protein (58aa)
50S ribosomal protein L33 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0A4_9BACT
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1046_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20440..21021)
DNA (582bp) protein (194aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0A5_9BACT
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:EDY20419.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
TraR/DksA family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1046_23
unknown

Not on your lists

21201..21545
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1046_24
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21567..22322)
DNA (756bp) protein (252aa)
Guanylate kinase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLB5_SYNLT
guanylate kinase
Guanylate kinase {ECO:0000313|EMBL:ADI01500.1}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
SCNpilot_cont_1000_p_scaffold_1046_25
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22319..23206)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GXZ7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA90179.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
SCNpilot_cont_1000_p_scaffold_1046_26

Not on your lists

comp(23234..23743)
DNA (510bp) protein (170aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDY3_9BACT
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AIA10720.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein tyrosine phosphatase
SCNpilot_cont_1000_p_scaffold_1046_27
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23852..24655
DNA (804bp) protein (268aa)
Gln/Arg/Lys/His transport ATP-binding protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTS8_GRABC rbh
Gln/Arg/Lys/His transport ATP-binding protein rbh
Gln/Arg/Lys/His transport ATP-binding protein {ECO:0000313|EMBL:ABI61774.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_1000_p_scaffold_1046_28
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

24655..26235
DNA (1581bp) protein (527aa)
Amino acid transport permease protein n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VID2_9PROT rbh
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein; K02030 polar amino acid transport system substrate-binding protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1046_29
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(26285..27472)
DNA (1188bp) protein (396aa)
Putative reductase OPIT5_30030 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
trans-2-enoyl-CoA reductase (NAD(+)) (EC:1.3.1.44)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI0003794F1C rbh
SCNpilot_cont_1000_p_scaffold_1046_30
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(27582..29540)
DNA (1959bp) protein (653aa)
Putative Transglutaminase/protease-like protein n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CWN0_DEIDV
transglutaminase/protease-like protein
Putative Transglutaminase/protease-like protein {ECO:0000313|EMBL:ACO46597.1}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923).;"
Displaying items 1-30 of 31 in total

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