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SCNpilot_cont_1000_p_scaffold_1094

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1094_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3..878
DNA (876bp) protein (292aa)
kamA; Lysine 2,3-aminomutase; K01843 lysine 2,3-aminomutase [EC:5.4.3.2] rbh
lysine 2,3-aminomutase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468CA rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1094_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

976..1968
DNA (993bp) protein (331aa)
iron permease n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B39481 rbh
FTR1 family protein; K07243 high-affinity iron transporter rbh
FTR1 family protein {ECO:0000313|EMBL:ACO31791.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCNpilot_cont_1000_p_scaffold_1094_3
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1975..2427
DNA (453bp) protein (151aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00013953};; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
sulfite reductase (NADPH) flavoprotein subunit alpha; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
Sulfite reductase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QMX2_9BURK
SCNpilot_cont_1000_p_scaffold_1094_4
unknown

Not on your lists

2424..2867
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1094_5
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

2883..3395
DNA (513bp) protein (171aa)
Ferritin n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEM1_9CHLR
ferritin
Tax=RBG_16_Zixibacteria_53_22_curated
SCNpilot_cont_1000_p_scaffold_1094_6
unknown

Not on your lists

3481..4404
DNA (924bp) protein (308aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1094_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4412..5587)
DNA (1176bp) protein (392aa)
alcohol dehydrogenase n=1 Tax=Patulibacter americanus RepID=UPI0003B4F2B0 rbh
Alcohol dehydrogenase iron-containing {ECO:0000313|EMBL:GAN75942.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
iron-containing alcohol dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_1094_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5603..7078)
DNA (1476bp) protein (492aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKY1_9BACT rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EEF59475.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_1094_9
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7084..8136)
DNA (1053bp) protein (351aa)
epimerase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036872D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL77252.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_1000_p_scaffold_1094_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8162..9235)
DNA (1074bp) protein (358aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D892_SINAD
dihydrodipicolinate synthase/N-acetylneuraminate lyase
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:AGA25085.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_1000_p_scaffold_1094_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9331..10350)
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZD9_9BACT
LacI family transcriptional regulator {ECO:0000313|EMBL:AHF90004.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1094_12
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10694..10927
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI00035C5C31
Tax=RBG_16_Ignavibacteria_36_9_curated
SCNpilot_cont_1000_p_scaffold_1094_13
unknown

Not on your lists

comp(11215..11370)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1094_14
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

11622..12908
DNA (1287bp) protein (429aa)
Acetyl esterase (Deacetylase) n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AU51_9BACT rbh
Acetyl esterase (Deacetylase) {ECO:0000313|EMBL:EIP98542.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
Acetyl xylan esterase
SCNpilot_cont_1000_p_scaffold_1094_15
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

12915..13697
DNA (783bp) protein (261aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PW66_CATAD
NAD-dependent epimerase/dehydratase
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
SCNpilot_cont_1000_p_scaffold_1094_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13793..14227
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745EA7
Uncharacterized protein {ECO:0000313|EMBL:EDY20459.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1094_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14202..15260
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D834_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17388.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1094_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15248..15841
DNA (594bp) protein (198aa)
General secretion pathway protein H n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D810_9BACT
General secretion pathway protein H {ECO:0000313|EMBL:EDY17364.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Tfp pilus assembly protein FimT-like protein; K08084 type IV fimbrial biogenesis protein FimT
SCNpilot_cont_1000_p_scaffold_1094_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15907..19575
DNA (3669bp) protein (1223aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746584
Uncharacterized protein {ECO:0000313|EMBL:EDY17365.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1094_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19750..19971)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL68817.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
SCNpilot_cont_1000_p_scaffold_1094_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19941..21686)
DNA (1746bp) protein (582aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU94_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHL68818.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1094_22
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(21821..22900)
DNA (1080bp) protein (360aa)
Endo-beta-mannanase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B103_9BACT rbh
Endo-beta-mannanase {ECO:0000313|EMBL:EIQ00945.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1094_23
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

22948..23769
DNA (822bp) protein (274aa)
Transcriptional regulator, AraC family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZY5_9CHLR
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFH82125.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1094_24
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(23773..25116)
DNA (1344bp) protein (448aa)
Carbohydrate-binding CenC domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IKL3_9BACT
Polysaccharide deacetylase {ECO:0000313|EMBL:AHF93425.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1094_25
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25136..25645)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J128_9BACT
Polysaccharide deacetylase {ECO:0000313|EMBL:AHF90145.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_1094_26
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25657..26991)
DNA (1335bp) protein (445aa)
Polysaccharide deacetylase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J124_9BACT rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:AHF90149.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_1094_27
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

27145..28764
DNA (1620bp) protein (540aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J133_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF90140.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
Displaying 27 items

View Taxonomy