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SCNpilot_cont_1000_p_scaffold_1146

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1146_1
unknown

Not on your lists

3..155
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1146_2
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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201..1487
DNA (1287bp) protein (429aa)
Chemiosmotic efflux system C protein C n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E58
Chemiosmotic efflux system C protein C {ECO:0000313|EMBL:CEG60121.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legionella micdadei).;"
Cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_1000_p_scaffold_1146_3
R_WOR_2_52_10, WOR-2, Bacteria

Not on your lists

1459..2544
DNA (1086bp) protein (362aa)
cecB; chemiosmotic efflux system C protein B id=14425865 bin=bin1_lowGC species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
cecB; Chemiosmotic efflux system C protein B
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_52_10_curated
SCNpilot_cont_1000_p_scaffold_1146_4
R_WOR_2_52_10, WOR-2, Bacteria

Not on your lists

2577..5705
DNA (3129bp) protein (1043aa)
Multidrug transporter AcrB n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7J5_SORCE rbh
multidrug transporter AcrB rbh
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_52_10_curated
SCNpilot_cont_1000_p_scaffold_1146_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

5770..6672
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRN8_OPITP rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACB77686.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1146_6
unknown

Not on your lists

6669..6890
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1146_7
unknown

Not on your lists

6887..7210
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1146_8
unknown

Not on your lists

7203..7421
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1146_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

7424..9007
DNA (1584bp) protein (528aa)
Efflux transporter, RND family, MFP subunit id=3377413 bin=GWF2_Lentisphaerae_50_93 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB rbh
Tax=GWF2_Lentisphaerae_50_93_curated
SCNpilot_cont_1000_p_scaffold_1146_10
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

8988..12245
DNA (3258bp) protein (1086aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPY2_OPITP rbh
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA rbh
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_1146_11
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

12304..12684
DNA (381bp) protein (127aa)
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_1146_12
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12922..14181
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AA0E
Putative secreted protein {ECO:0000313|EMBL:CEG60118.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legionella micdadei).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1146_13
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

14196..14657
DNA (462bp) protein (154aa)
Predicted metal transporter n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JVY8_9BACT
Metal transporter {ECO:0000313|EMBL:KIE59328.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
metal transporter
SCNpilot_cont_1000_p_scaffold_1146_14
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14768..15505
DNA (738bp) protein (246aa)
HAD-superfamily hydrolase n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WRH7_9BACI
HAD-superfamily hydrolase {ECO:0000313|EMBL:ENH97005.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;"
hypothetical protein; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_1000_p_scaffold_1146_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15523..17820
DNA (2298bp) protein (766aa)
putative glycosidase (EC:3.2.1.-)
amylopullulanase id=7200725 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_1000_p_scaffold_1146_16
unknown

Not on your lists

17971..18339
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1146_17
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18859..19716)
DNA (858bp) protein (286aa)
Chemiosmotic efflux system C protein C n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E58
chemiosmotic efflux system C protein C
Outer membrane efflux protein {ECO:0000313|EMBL:EDY80778.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
SCNpilot_cont_1000_p_scaffold_1146_18
unknown

Not on your lists

20109..20828
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1146_19
unknown

Not on your lists

21207..21659
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1146_20
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

21678..22955
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037AC16B
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACB77712.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1146_21
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

22952..23761
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J061_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHF89472.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1146_22
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

23771..26917
DNA (3147bp) protein (1049aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AYJ9_9BACT rbh
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:EIQ00091.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
CzcA family heavy metal efflux protein; K07239 heavy-metal exporter, HME family rbh
SCNpilot_cont_1000_p_scaffold_1146_23
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

26934..27644
DNA (711bp) protein (237aa)
Heavy metal RND efflux outer membrane protein, CzcC family n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DZZ5_METI4
tolC; Heavy metal RND efflux outer membrane protein, CzcC family
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:ACD82656.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
Displaying 23 items

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