ggKbase home page

SCNpilot_cont_1000_p_scaffold_1176

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1176_1
unknown

Not on your lists

comp(2..529)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1176_2
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

742..2685
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B34CF8 rbh
hypothetical protein rbh
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_1176_3
unknown

Not on your lists

comp(2708..3406)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1176_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3403..6726)
DNA (3324bp) protein (1108aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYS3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20614.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1176_5
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(6997..8067)
DNA (1071bp) protein (357aa)
Transcriptional regulator, LacI family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J126_9BACT
LacI family transcriptional regulator {ECO:0000313|EMBL:AHF90147.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1176_6
unknown

Not on your lists

8208..9008
DNA (801bp) protein (267aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1176_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(9092..9688)
DNA (597bp) protein (199aa)
Glycosyltransferase 36 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQI5_OPITP
glycosyltransferase
Glycosyltransferase 36 {ECO:0000313|EMBL:ACB75594.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1176_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10406..10909
DNA (504bp) protein (168aa)
Mg chelatase, subunit ChlI n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q2_9BACT
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:EDY17542.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
SCNpilot_cont_1000_p_scaffold_1176_9
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10969..13305)
DNA (2337bp) protein (779aa)
Heparinase II/III family protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYA9_9BACT
Heparinase {ECO:0000313|EMBL:AHF89077.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1176_10
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(13320..13979)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUR5_9BACT
N-terminal cleavage protein {ECO:0000313|EMBL:AHF91330.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1176_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14115..15143
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ITQ4_9BACT
LacI family transcriptional regulator {ECO:0000313|EMBL:AHF90638.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1176_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

15258..16259
DNA (1002bp) protein (334aa)
Putative dehydrogenase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ARK2_9BACT
oxidoreductase domain-containing protein; K03810 virulence factor
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_1176_13
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

16333..17808
DNA (1476bp) protein (492aa)
Autotransporter-associated beta strand repeat protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUF6_9BACT rbh
Autotransporter {ECO:0000313|EMBL:AHF91244.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
autotransporter-associated beta strand repeat-containing protein
SCNpilot_cont_1000_p_scaffold_1176_14
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

17820..18422
DNA (603bp) protein (201aa)
Heparinase II/III family protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IU84_9BACT
Heparinase II/III family protein {ECO:0000313|EMBL:AHF91117.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_1176_15
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18426..20228
DNA (1803bp) protein (601aa)
Transporter, SSS family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN91_9BACT rbh
Transporter, SSS family protein {ECO:0000313|EMBL:EDY85006.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
sodium/glucose cotransporter rbh
SCNpilot_cont_1000_p_scaffold_1176_16
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

20225..21274
DNA (1050bp) protein (350aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYA8_9BACT rbh
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:AHF89076.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein
SCNpilot_cont_1000_p_scaffold_1176_17
unknown

Not on your lists

21846..22190
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1176_18
unknown

Not on your lists

comp(22397..23950)
DNA (1554bp) protein (518aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1176_19
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

24163..25005
DNA (843bp) protein (281aa)
Polysaccharide deacetylase n=1 Tax=Caldanaerobius polysaccharolyticus RepID=I6R6Y3_9THEO
polysaccharide deacetylase
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
SCNpilot_cont_1000_p_scaffold_1176_20
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

25049..26461
DNA (1413bp) protein (471aa)
Major facilitator superfamily MFS_1 n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J1J3_9BACT
Sodium:melibiose symporter {ECO:0000313|EMBL:AHF90102.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
major facilitator superfamily protein
SCNpilot_cont_1000_p_scaffold_1176_21
unknown

Not on your lists

comp(26464..26955)
DNA (492bp) protein (164aa)

This feature has no annotations

Displaying 21 items

View Taxonomy