ggKbase home page

SCNpilot_cont_1000_p_scaffold_1324

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1324_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2..2500)
DNA (2499bp) protein (833aa)
Putative uncharacterized protein id=4668346 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
SCNpilot_cont_1000_p_scaffold_1324_2
unknown

Not on your lists

comp(2487..2810)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1324_3
unknown

Not on your lists

comp(2807..3052)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1324_4
unknown

Not on your lists

comp(3049..3417)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1324_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3511..4236)
DNA (726bp) protein (242aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG8_OPITP
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACB74402.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1324_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(4233..5333)
DNA (1101bp) protein (367aa)
Signal transduction histidine kinase, LytS n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG7_OPITP
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACB74401.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1324_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5338..6369)
DNA (1032bp) protein (344aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPP4_9PROT
phosphate binding protein; K02040 phosphate transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
SCNpilot_cont_1000_p_scaffold_1324_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

6507..6944
DNA (438bp) protein (146aa)
Transcriptional regulator, ArsR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXF1_OPITP
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACB76946.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1324_9
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7098..8072
DNA (975bp) protein (325aa)
Strongly similar to phosphate binding protein of ABC-type phosphate transport system n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2D4_9BACT rbh
phosphate binding protein; K02040 phosphate transport system substrate-binding protein rbh
Tax=GWC2_Geobacteraceae_53_11_curated
SCNpilot_cont_1000_p_scaffold_1324_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8197..10470
DNA (2274bp) protein (758aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2URP4_AKKM8 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW97621.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
binding-protein-dependent transporters inner membrane component; K02037 phosphate transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_1324_11
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

10472..12130
DNA (1659bp) protein (553aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2URP3_AKKM8 rbh
phosphate ABC transporter permease; K02038 phosphate transport system permease protein rbh
Tax=GWA2_OP3_52_8_curated
SCNpilot_cont_1000_p_scaffold_1324_12
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

12134..12985
DNA (852bp) protein (284aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
Phosphate ABC transporter, ATPase subunit n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2URP2_AKKM8 rbh
Tax=GWA2_OP3_52_8_curated
SCNpilot_cont_1000_p_scaffold_1324_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13007..13714
DNA (708bp) protein (236aa)
phosphate uptake regulator, PhoU n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E5D
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1324_14
unknown

Not on your lists

13724..14098
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1324_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14110..14931)
DNA (822bp) protein (274aa)
Arsenite S-adenosylmethyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIA6_9PROT rbh
arsM; arsenite S-adenosylmethyltransferase rbh
Arsenite S-adenosylmethyltransferase {ECO:0000313|EMBL:BAN35961.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_cont_1000_p_scaffold_1324_16
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14977..15582)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI0003771486
sigZ; SigZ family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1052585 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. spizizenii (strain TU-B-10).;"
SCNpilot_cont_1000_p_scaffold_1324_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15579..16511)
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
trxB; Thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Thioredoxin reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG96_9BACT rbh
SCNpilot_cont_1000_p_scaffold_1324_18
Yersinia intermedia, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16904..17299
DNA (396bp) protein (132aa)
arsD; Arsenical resistance operon trans-acting repressor arsD (EC:3.6.3.16)
Arsenical resistance operon trans-acting repressor arsD n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SZ56_YERIN
Arsenical resistance operon trans-acting repressor ArsD {ECO:0000313|EMBL:AJJ19232.1}; TaxID=631 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia intermedia.;"
SCNpilot_cont_1000_p_scaffold_1324_19
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17289..19091
DNA (1803bp) protein (601aa)
Arsenite-activated ATPase ArsA n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T782_9PLAN
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:EMI41376.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1324_20
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

19103..19309
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DUY6_METI4
Uncharacterized protein {ECO:0000313|EMBL:KIE58283.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1324_21
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

19316..20395
DNA (1080bp) protein (360aa)
Arsenical-resistance protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXF2_OPITP rbh
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family rbh
Arsenical-resistance protein {ECO:0000313|EMBL:ACB76947.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1324_22
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

20409..20849
DNA (441bp) protein (147aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1]
Protein tyrosine phosphatase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXF3_OPITP
Protein tyrosine phosphatase {ECO:0000313|EMBL:ACB76948.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1324_23
Streptococcus gallolyticus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20910..21329
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=4860291 bin=GWA2_Elusi-like_A8_64_40 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
EamA-like transporter family protein; K08978 putative membrane protein
EamA-like transporter family protein {ECO:0000313|EMBL:BAK28634.1}; TaxID=981539 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus gallolyticus (strain ATCC 43143 / F-1867).;"
SCNpilot_cont_1000_p_scaffold_1324_24
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

21449..21718
DNA (270bp) protein (90aa)
Transcriptional regulator, ArsR family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDZ4_9BACT
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:EDY82738.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1324_25
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

21835..22866
DNA (1032bp) protein (344aa)
Permease n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FCY1_DESAA rbh
permease; K07089 rbh
Tax=GWB1_Bdellovibrionales_55_8_curated
SCNpilot_cont_1000_p_scaffold_1324_26
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

22880..23272
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGH7_9BACT
hypothetical protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCNpilot_cont_1000_p_scaffold_1324_27
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23269..24288
DNA (1020bp) protein (340aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T614_9PLAN rbh
RND family efflux transporter MFP subunit
Tax=GWF2_Verrucomicrobia_62_7_curated
Displaying 27 items

View Taxonomy