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SCNpilot_cont_1000_p_scaffold_1592

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1592_1
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..646
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CF46_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM28187.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
SCNpilot_cont_1000_p_scaffold_1592_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

760..1245
DNA (486bp) protein (162aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZB3_9BACT
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EDY20804.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1592_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1259..2377
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZB0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20801.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1592_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2411..3868)
DNA (1458bp) protein (486aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D456_9BACT rbh
carbohydrate kinase rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1592_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3900..5045)
DNA (1146bp) protein (382aa)
Chaperone protein DnaJ n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D417_9BACT rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ rbh
SCNpilot_cont_1000_p_scaffold_1592_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5042..5578)
DNA (537bp) protein (179aa)
Protein GrpE n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D416_9BACT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE
SCNpilot_cont_1000_p_scaffold_1592_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5575..7005)
DNA (1431bp) protein (477aa)
Protein serine phosphatase with GAF(S) sensor(S) n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D415_9BACT rbh
Protein serine phosphatase with GAF(S) sensor(S) {ECO:0000313|EMBL:EDY18995.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
protein serine phosphatase with GAF(s) sensor(s)
SCNpilot_cont_1000_p_scaffold_1592_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7039..7578)
DNA (540bp) protein (180aa)
Anti-sigma-factor antagonist n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D414_9BACT
Anti-sigma-factor antagonist {ECO:0000313|EMBL:EDY18994.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anti-sigma-factor antagonist
SCNpilot_cont_1000_p_scaffold_1592_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7640..8155)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D413_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18993.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1592_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8290..8805
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW63_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21655.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1592_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8802..9368
DNA (567bp) protein (189aa)
phosphoheptose isomerase (EC:5.3.1.-)
Phosphoheptose isomerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP7_9BACT
Phosphoheptose isomerase {ECO:0000313|EMBL:EDY20211.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1592_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9365..10471
DNA (1107bp) protein (369aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Peptidase A24A domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZQ0_9BACT rbh
Peptidase A24A domain protein {ECO:0000313|EMBL:EDY20214.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1592_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10504..12330
DNA (1827bp) protein (609aa)
lipid A export permease/ATP-binding protein MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R6_9BACT rbh
ABC transporter-related protein {ECO:0000313|EMBL:EDY17124.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1592_14

Not on your lists

comp(12393..13409)
DNA (1017bp) protein (339aa)
peptide chain release factor 2 n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744B49 rbh
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
peptide chain release factor 2; K02836 peptide chain release factor 2 rbh
SCNpilot_cont_1000_p_scaffold_1592_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13591..14916)
DNA (1326bp) protein (442aa)
MiaB-like tRNA modifying protein YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] rbh
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR4_9BACT rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1592_16
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14974..15645)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E3BB31
Uncharacterized protein {ECO:0000313|EMBL:AIF48012.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
XRE family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1592_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15793..18273)
DNA (2481bp) protein (827aa)
Cell divisionFtsK/SpoIIIE n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR6_9BACT rbh
Cell divisionFtsK/SpoIIIE {ECO:0000313|EMBL:EDY20230.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family rbh
SCNpilot_cont_1000_p_scaffold_1592_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18405..19316
DNA (912bp) protein (304aa)
Mannose-6-phosphate isomerase; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8]
Mannose-6-phosphate isomerase type I n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR7_9BACT rbh
Mannose-6-phosphate isomerase type I {ECO:0000313|EMBL:EDY20231.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1592_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(19313..19990)
DNA (678bp) protein (226aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY01_9BACT
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:EDY21149.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
NCAIR mutase-like protein; K06898
SCNpilot_cont_1000_p_scaffold_1592_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(19980..20450)
DNA (471bp) protein (157aa)
acetyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744371
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EDY21148.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GCN5-related N-acetyltransferase
SCNpilot_cont_1000_p_scaffold_1592_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20508..20690)
DNA (183bp) protein (61aa)
DNA mismatch repair protein MutL n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D994_9BACT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 21 items

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