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SCNpilot_cont_1000_p_scaffold_1749

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1749_1
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..172)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003735F4A
TetR family transcriptional regulator
Tax=RBG_16_Gammaproteobacteria_66_13_curated
SCNpilot_cont_1000_p_scaffold_1749_2
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

281..727
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A63
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
SCNpilot_cont_1000_p_scaffold_1749_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1143..1667
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRP5_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED67230.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1749_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1860..3584
DNA (1725bp) protein (575aa)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:EDY16584.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EDY16584.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
circadian clock protein KaiC (EC:2.7.11.1); K08482 circadian clock protein KaiC rbh
Putative circadian clock protein, KaiC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAC3_9BACT rbh
SCNpilot_cont_1000_p_scaffold_1749_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3581..3934
DNA (354bp) protein (118aa)
KaiB domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6C2_GEODF
KaiB domain-containing protein; K08481 circadian clock protein KaiB
Circadian clock KaiB domain protein {ECO:0000313|EMBL:ACM21910.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
SCNpilot_cont_1000_p_scaffold_1749_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3963..4328
DNA (366bp) protein (122aa)
KaiB domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAC6_9BACT
KaiB domain protein {ECO:0000313|EMBL:EDY16587.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
KaiB domain-containing protein
SCNpilot_cont_1000_p_scaffold_1749_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4325..6019
DNA (1695bp) protein (565aa)
Histidine kinase {ECO:0000313|EMBL:EDY16588.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EDY16588.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAC7_9BACT rbh
PAS/PAC sensor hybrid histidine kinase rbh
SCNpilot_cont_1000_p_scaffold_1749_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6066..6878)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003766250
LytTR family two component transcriptional regulator
Putative two-component response regulator protein {ECO:0000313|EMBL:CDH83351.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
SCNpilot_cont_1000_p_scaffold_1749_9
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6955..8094)
DNA (1140bp) protein (380aa)
Putative two-component sensor histidine kinase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I0V2_AZOC5
two-component sensor histidine kinase
Putative two-component sensor histidine kinase {ECO:0000313|EMBL:BAF87298.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_1000_p_scaffold_1749_10
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8171..12265
DNA (4095bp) protein (1365aa)
chitinase, class II (EC:3.2.1.14); K01183 chitinase [EC:3.2.1.14] rbh
Endoglucanase Y n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C7P4_9PLAN rbh
Endoglucanase Y {ECO:0000313|EMBL:EDL59167.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
SCNpilot_cont_1000_p_scaffold_1749_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12335..12676)
DNA (342bp) protein (114aa)
Transcriptional regulator, ArsR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAB9_9BACT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEF63460.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1749_12
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12714..13289
DNA (576bp) protein (192aa)
Rhodanese domain-containing protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RTX1_9PLAN
Rhodanese domain-containing protein {ECO:0000313|EMBL:EMI22656.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1749_13

Not on your lists

13286..14944
DNA (1659bp) protein (553aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00359 NADH oxidase [EC:1.6.-.-] rbh
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000380F773 rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48809.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_1749_14
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(14941..15939)
DNA (999bp) protein (333aa)
sugar kinase, ribokinase family; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
PfkB domain protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TRR4_9FIRM
Tax=CG_Arma_02
SCNpilot_cont_1000_p_scaffold_1749_15
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

16177..17325
DNA (1149bp) protein (383aa)
Regulator of arylsulfatase activity n=1 Tax=mine drainage metagenome RepID=E6QP35_9ZZZZ
syrB; transcriptional regulator; K06871 uncharacterized protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_1749_16
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

Not on your lists

comp(17343..17717)
DNA (375bp) protein (125aa)
Translation initiation factor SUI1 n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXP0_9BACT
Translation initiation factor SUI1 {ECO:0000313|EMBL:ACO70863.1}; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
translation initiation factor SUI1; K03113 translation initiation factor 1
SCNpilot_cont_1000_p_scaffold_1749_17
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(17758..18507)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7G9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1749_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18533..19165
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWH4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21766.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1749_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

19389..20603
DNA (1215bp) protein (405aa)
glucuronate isomerase (EC:5.3.1.12); K01812 glucuronate isomerase [EC:5.3.1.12] rbh
Uronate isomerase {ECO:0000255|HAMAP-Rule:MF_00675}; EC=5.3.1.12 {ECO:0000255|HAMAP-Rule:MF_00675};; Glucuronate isomerase {ECO:0000255|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000255|HAMAP-Rule:MF_00675}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Uronate isomerase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=UXAC_SOLUE rbh
SCNpilot_cont_1000_p_scaffold_1749_20
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20732..21565)
DNA (834bp) protein (278aa)
Dehydrogenase/decarboxylase protein n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HQB8_MYCMM
dehydrogenase/decarboxylase protein
Dehydrogenase/decarboxylase protein {ECO:0000313|EMBL:ACC42410.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
SCNpilot_cont_1000_p_scaffold_1749_21
unknown

Not on your lists

comp(21624..21707)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 21 items

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