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SCNpilot_cont_1000_p_scaffold_1982

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1982_1
Succinatimonas hippei, Succinatimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..387)
DNA (387bp) protein (129aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=762983 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Succinivibrionaceae; Succinatimonas.;" source="Succinatimonas hippei YIT 12066.;"
Acetate kinase n=1 Tax=Succinatimonas hippei YIT 12066 RepID=E8LIG2_9GAMM
ackA-1; acetate kinase
SCNpilot_cont_1000_p_scaffold_1982_2
unknown

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553..1095
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1982_3
bacterium UASB270, Bacteria

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comp(1099..2178)
DNA (1080bp) protein (360aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
galactokinase; K00849 galactokinase [EC:2.7.1.6]
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003787D2E
SCNpilot_cont_1000_p_scaffold_1982_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2280..2693
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D008_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1982_5
unknown

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2712..3125
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1982_6
unknown

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3122..3514
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1982_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3631..4719
DNA (1089bp) protein (363aa)
Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D005_9BACT rbh
Twitching motility protein {ECO:0000313|EMBL:EDY20319.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
twitching motility protein; K02669 twitching motility protein PilT rbh
SCNpilot_cont_1000_p_scaffold_1982_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4723..5859
DNA (1137bp) protein (379aa)
Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D003_9BACT rbh
Twitching motility protein {ECO:0000313|EMBL:EDY20317.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
twitching motility protein; K02669 twitching motility protein PilT rbh
SCNpilot_cont_1000_p_scaffold_1982_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5895..6647
DNA (753bp) protein (251aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Baf family transcriptional acitvator; K03525 type III pantothenate kinase [EC:2.7.1.33]
Type III pantothenate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7X5_9BACT
SCNpilot_cont_1000_p_scaffold_1982_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6700..6885)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZT8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20252.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1982_11
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7095..7622
DNA (528bp) protein (176aa)
ahpC; alkyl hydroperoxide reductase C; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Alkyl hydroperoxide reductase C n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQZ2_RHOCS
Alkyl hydroperoxide reductase C {ECO:0000313|EMBL:ACI97878.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_1000_p_scaffold_1982_12

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7670..8197
DNA (528bp) protein (176aa)
Alkyl hydroperoxide reductase AhpD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=AHPD_ANADE
Marine sediment metagenome DNA, contig: S01H1_L01765 {ECO:0000313|EMBL:GAF84475.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alkylhydroperoxidase; K04756 alkyl hydroperoxide reductase subunit D
SCNpilot_cont_1000_p_scaffold_1982_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8282..8635)
DNA (354bp) protein (118aa)
iojap-like protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745DE2
iojap family protein; K09710 ribosome-associated protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_1982_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8628..9203)
DNA (576bp) protein (192aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZU0_9BACT
SCNpilot_cont_1000_p_scaffold_1982_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9224..10342
DNA (1119bp) protein (373aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
bglX; Beta-glucosidase-related glycosidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] rbh
Beta-N-acetylhexosaminidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZU1_9BACT rbh
SCNpilot_cont_1000_p_scaffold_1982_16
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(10347..11189)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UPR6_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05944.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
SCNpilot_cont_1000_p_scaffold_1982_17
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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11262..12659
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYZ5_9BACT
peptidase C14 caspase catalytic subunit p20
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
SCNpilot_cont_1000_p_scaffold_1982_18
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

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12940..13482
DNA (543bp) protein (181aa)
Transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B3N5_9BACT
MarR family transcriptional regulator {ECO:0000313|EMBL:AKC83168.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
MarR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1982_19
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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13475..14611
DNA (1137bp) protein (379aa)
RND family efflux transporter, MFP subunit n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B3N6_9BACT rbh
RND family efflux transporter MFP subunit rbh
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
SCNpilot_cont_1000_p_scaffold_1982_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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14643..16256
DNA (1614bp) protein (538aa)
Acriflavin resistance protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP1_9BACT
Acriflavin resistance protein {ECO:0000313|EMBL:EDY20205.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acriflavin resistance protein
SCNpilot_cont_1000_p_scaffold_1982_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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16240..17292
DNA (1053bp) protein (351aa)
Acriflavin resistance protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP1_9BACT
Acriflavin resistance protein {ECO:0000313|EMBL:EDY20205.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acriflavin resistance protein
Displaying 21 items

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