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SCNpilot_cont_1000_p_scaffold_7370

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7370_1
unknown

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comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7370_2
Bacillus niacini, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(341..2239)
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI00037FDDE6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM45070.1}; TaxID=86668 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus niacini.;"
hypothetical protein; K09955 hypothetical protein
SCNpilot_cont_1000_p_scaffold_7370_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2306..3115
DNA (810bp) protein (270aa)
Putative transcriptional regulator, AraC family n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z369_XANCT
Putative transcriptional regulator, AraC family {ECO:0000313|EMBL:EKU25454.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
regulatory protein
SCNpilot_cont_1000_p_scaffold_7370_4
bacterium UASB270, Bacteria

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3778..4734
DNA (957bp) protein (319aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
beta-glucosidase; K05350 beta-glucosidase [EC:3.2.1.21]
beta-galactosidase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483DED
SCNpilot_cont_1000_p_scaffold_7370_5
unknown

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4782..5297
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7370_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(5315..6772)
DNA (1458bp) protein (486aa)
Glucose-inhibited division protein A id=2852342 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good + rbh
FAD dependent oxidoreductase
Tax=GWF2_Lentisphaerae_49_21_curated
SCNpilot_cont_1000_p_scaffold_7370_7
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

6952..7875
DNA (924bp) protein (308aa)
Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IKK6_9BACT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC94461.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
pocR; pdu/cob regulatory protein pocR
SCNpilot_cont_1000_p_scaffold_7370_8
unknown

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comp(7928..8794)
DNA (867bp) protein (289aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7370_9
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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9246..9860
DNA (615bp) protein (205aa)
Twitching motility protein pilT n=1 Tax=Vibrio campbellii (strain ATCC BAA-1116 / BB120) RepID=T2AQZ8_VIBCB
pili retraction protein PilT; K08084 type IV fimbrial biogenesis protein FimT
Uncharacterized protein {ECO:0000313|EMBL:ABU75103.1}; TaxID=338187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii (strain ATCC BAA-1116 / BB120).;"
Displaying 9 items

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