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SCNpilot_cont_1000_p_scaffold_2395

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2395_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3..716
DNA (714bp) protein (238aa)
Glycosyl transferase, group 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DXB2_9PROT
Glycosyl transferase family 1 {ECO:0000313|EMBL:KIO49423.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
group 1 glycosyl transferase
SCNpilot_cont_1000_p_scaffold_2395_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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713..2089
DNA (1377bp) protein (459aa)
capsular polysaccharide biosynthesis protein CapK; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Coenzyme F390 synthetase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLK7_9PROT rbh
Capsule biosynthesis protein CapK {ECO:0000313|EMBL:KIO49422.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_2395_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2219..3682
DNA (1464bp) protein (488aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCC1_NITMU rbh
polysaccharide biosynthesis protein rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ABB73600.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_2395_4
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3685..5643)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSN4_9GAMM rbh
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EFV94689.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2395_5
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5768..6121)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WI04_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KES24570.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2395_6
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6139..6828)
DNA (690bp) protein (230aa)
sam-dependent methyltransferase (EC:2.1.1.-)
Sam-dependent methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSN6_9GAMM rbh
Methyltransferase 24 {ECO:0000313|EMBL:EAZ91309.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
SCNpilot_cont_1000_p_scaffold_2395_7
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6825..7835)
DNA (1011bp) protein (337aa)
glycosyl transferase family 2 n=1 Tax=Pseudomonas sp. R81 RepID=UPI00029A6CA1 rbh
glycosyl transferase family protein rbh
Tax=BJP_IG2158_Methylococcales_50_91
SCNpilot_cont_1000_p_scaffold_2395_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8176..9117
DNA (942bp) protein (314aa)
Glycosyl transferase, family 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB6_NITMU rbh
glycosyl transferase family protein rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABB73605.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_2395_9
unknown

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comp(9056..9265)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2395_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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9274..10239
DNA (966bp) protein (322aa)
Uncharacterized protein id=1896434 bin=GWE2_Gallionellales_58_10 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
SCNpilot_cont_1000_p_scaffold_2395_11
unknown

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comp(10174..10326)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2395_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10392..11366)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB5_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB73606.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_2395_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12012..12695
DNA (684bp) protein (228aa)
adenylylsulfate kinase (EC:2.7.1.25); K00860 adenylylsulfate kinase [EC:2.7.1.25] rbh
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp
Adenylyl-sulfate kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB4_NITMU rbh
SCNpilot_cont_1000_p_scaffold_2395_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12815..14146
DNA (1332bp) protein (444aa)
O-antigen polymerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCB3_NITMU rbh
Polymerase {ECO:0000313|EMBL:KIO49418.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
O-antigen polymerase rbh
SCNpilot_cont_1000_p_scaffold_2395_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14283..14810
DNA (528bp) protein (176aa)
COGs COG0726 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK79_9PROT
Polysaccharide deacetylase {ECO:0000313|EMBL:KIO49477.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
polysaccharide deacetylase
Displaying 15 items

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