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SCNpilot_cont_1000_p_scaffold_6521

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_6521_1
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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1..603
DNA (603bp) protein (201aa)
integrase n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI0003653D2B
Transposase {ECO:0000313|EMBL:AKH21145.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
ISxac2 transposase; K07497 putative transposase
SCNpilot_cont_1000_p_scaffold_6521_2
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(955..1365)
DNA (411bp) protein (137aa)
Phage terminase small subunit n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MCC6_BORPB
phage terminase small subunit
Phage terminase small subunit {ECO:0000313|EMBL:CCJ48959.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
SCNpilot_cont_1000_p_scaffold_6521_3
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1669..3945)
DNA (2277bp) protein (759aa)
Virulence-associated E family protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T9G2_ALCXX rbh
Virulence-associated E family protein {ECO:0000313|EMBL:EGP43122.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
virulence-associated E family protein rbh
SCNpilot_cont_1000_p_scaffold_6521_4
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3959..4180)
DNA (222bp) protein (74aa)
Prophage CP4-57 regulatory n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHV3_GALCS
prophage CP4-57 regulatory
Prophage CP4-57 regulatory {ECO:0000313|EMBL:ADL56043.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
SCNpilot_cont_1000_p_scaffold_6521_5
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4319..5071)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZVU2_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC32908.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola polaris LMG 21857.;"
SCNpilot_cont_1000_p_scaffold_6521_6
R_Proteobacteria_53_8, Proteobacteria, Bacteria

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comp(5180..6415)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000362366B rbh
phage integrase rbh
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
SCNpilot_cont_1000_p_scaffold_6521_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6650..6994)
DNA (345bp) protein (115aa)
Putative plasmid stabilization element ParE n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XK4_NITEU
Plasmid stabilization protein ParE {ECO:0000313|EMBL:KIO48297.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
plasmid stabilization element ParE
SCNpilot_cont_1000_p_scaffold_6521_8
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6995..7237)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XK3_NITEU
hypothetical protein; K07746 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD84173.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
SCNpilot_cont_1000_p_scaffold_6521_9
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7363..7614
DNA (252bp) protein (84aa)
Fic family protein (Filamentation induced by cAMP) n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAC0_METSZ
Fic family protein (Filamentation induced by cAMP) {ECO:0000313|EMBL:CCD31925.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
AsnC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_6521_10
unknown

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comp(7745..7843)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 10 items

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