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SCNpilot_cont_1000_p_scaffold_1962

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1962_1
unknown

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3..488
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1962_2
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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489..869
DNA (381bp) protein (127aa)
Ribosomal protein S12 n=1 Tax=Naegleria gruberi RepID=Q9G8S2_NAEGR
Ribosomal protein S12 {ECO:0000313|EMBL:AAG17782.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
SCNpilot_cont_1000_p_scaffold_1962_3
Callorhinchus milii, Callorhinchus, Chimaeriformes, Holocephali, Chordata, Metazoa

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1281..1781
DNA (501bp) protein (167aa)
Ribosomal protein L11 n=1 Tax=Naegleria gruberi RepID=Q9G8Q7_NAEGR
39S ribosomal protein L11, mitochondrial-like protein {ECO:0000313|EMBL:AFP08812.1}; TaxID=7868 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus.;" source="Callorhinchus milii (Ghost shark).;"
39S ribosomal protein L11, mitochondrial-like
SCNpilot_cont_1000_p_scaffold_1962_4
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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1818..2726
DNA (909bp) protein (303aa)
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
Succinate:cytochrome c oxidoreductase subunit 2 n=1 Tax=Naegleria gruberi RepID=Q9G8R9_NAEGR rbh
SDH1; succinate dehydrogenase
SCNpilot_cont_1000_p_scaffold_1962_5
Stachyamoeba lipophora, Stachyamoeba, Schizopyrenida, Heterolobosea, Eukaryota

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2756..3304
DNA (549bp) protein (183aa)
NADH dehydrogenase subunit 9 {ECO:0000313|EMBL:AJF22919.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AJF22919.1};; TaxID=463046 species="Eukaryota; Heterolobosea; Schizopyrenida; Gruberellidae; Stachyamoeba.;" source="Stachyamoeba lipophora.;"
nad9; NADH dehydrogenase subunit 9; K03936 NADH dehydrogenase (ubiquinone) Fe-S protein 3 [EC:1.6.5.3 1.6.99.3]
NADH dehydrogenase subunit 9 n=1 Tax=Phytophthora gallica RepID=K9LYQ8_9STRA
SCNpilot_cont_1000_p_scaffold_1962_6
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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3426..4895
DNA (1470bp) protein (490aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
nad4, ndhD; nad4; K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Naegleria gruberi RepID=Q9G8P5_NAEGR rbh
SCNpilot_cont_1000_p_scaffold_1962_7
unknown

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4942..5208
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1962_8
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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5408..6892
DNA (1485bp) protein (495aa)
nad2, ndhB; nad2; K03879 NADH-ubiquinone oxidoreductase chain 2 [EC:1.6.5.3]
NADH dehydrogenase subunit 2 n=1 Tax=Naegleria fowleri RepID=M4H747_NAEFO rbh
NADH dehydrogenase subunit 2 {ECO:0000313|EMBL:AFP72327.1}; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (Brain eating amoeba).;"
SCNpilot_cont_1000_p_scaffold_1962_9
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

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6996..8072
DNA (1077bp) protein (359aa)
PREDICTED: hypothetical protein LOC701581 n=1 Tax=Macaca mulatta RepID=UPI0000D9B168
DSPP; uncharacterized LOC701581
Dentin sialophosphoprotein; Dentin matrix protein 3; Short=DMP-3;; Contains:; Dentin phosphoprotein; Dentin phosphophoryn; Short=DPP;; Contains:; Dentin sialoprotein; Short=DSP;; Flags: Precursor;; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
SCNpilot_cont_1000_p_scaffold_1962_10
unknown

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9058..10020
DNA (963bp) protein (321aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1962_11
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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10188..10946
DNA (759bp) protein (253aa)
ATP synthase A chain (protein 6); K02126 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Naegleria gruberi RepID=Q9G8P2_NAEGR
ATP synthase subunit a {ECO:0000256|RuleBase:RU004450}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
SCNpilot_cont_1000_p_scaffold_1962_12
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

10948..11709
DNA (762bp) protein (254aa)
Haem biosynthesis protein n=1 Tax=Naegleria gruberi RepID=Q9G8S0_NAEGR
Haem biosynthesis protein {ECO:0000313|EMBL:AAG17784.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
cytochrome c oxidase assembly protein CtaG/Cox11 containing protein
SCNpilot_cont_1000_p_scaffold_1962_13
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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11795..12970
DNA (1176bp) protein (392aa)
Cytochrome b n=1 Tax=Naegleria gruberi RepID=Q9G8R4_NAEGR rbh
Cytochrome b {ECO:0000256|RuleBase:RU000300}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
cytochrome B; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
SCNpilot_cont_1000_p_scaffold_1962_14
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

13218..14405
DNA (1188bp) protein (396aa)
NADH dehydrogenase subunit 7 {ECO:0000313|EMBL:AAG17816.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AAG17816.1};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
nad7; NADH dehydrogenase subunit 7; K03935 NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:1.6.5.3 1.6.99.3]
NADH dehydrogenase subunit 7 n=1 Tax=Naegleria gruberi RepID=Q9G8N8_NAEGR rbh
SCNpilot_cont_1000_p_scaffold_1962_15
unknown

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14546..15022
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1962_16
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

15082..15447
DNA (366bp) protein (122aa)
NADH-ubiquinone oxidoreductase chain 3 {ECO:0000256|RuleBase:RU003640}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003640};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
nuoA; NADH-quinone oxidoreductase, subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Naegleria gruberi RepID=Q9G8P1_NAEGR
SCNpilot_cont_1000_p_scaffold_1962_17
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

15571..15831
DNA (261bp) protein (87aa)
NADH-ubiquinone oxidoreductase chain 4L {ECO:0000256|RuleBase:RU004419}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU004419};; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (Brain eating amoeba).;"
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Naegleria fowleri RepID=M4H736_NAEFO
nad4L; NADH dehydrogenase subunit 4L
SCNpilot_cont_1000_p_scaffold_1962_18
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

15858..17396
DNA (1539bp) protein (513aa)
NADH-ubiquinone oxidoreductase chain 5 {ECO:0000256|RuleBase:RU003404}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003404};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Naegleria gruberi RepID=Q9G8R5_NAEGR rbh
nad5; NADH dehydrogenase subunit 5
Displaying 18 items

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