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SCNpilot_cont_1000_p_scaffold_2111

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2111_1
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..972)
DNA (972bp) protein (324aa)
phospholipase c precursor (EC:3.1.4.3); K01114 phospholipase C [EC:3.1.4.3]
Putative phospholipase c protein {ECO:0000313|EMBL:CBA15176.1}; EC=3.1.4.3 {ECO:0000313|EMBL:CBA15176.1};; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
Putative phospholipase c protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UCE2_XANAP
SCNpilot_cont_1000_p_scaffold_2111_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1161..3458
DNA (2298bp) protein (766aa)
TonB-dependent receptor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFI3_PHEZH rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACG77064.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_1000_p_scaffold_2111_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3538..4026)
DNA (489bp) protein (163aa)
30S ribosomal protein S9 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030DD184
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_1000_p_scaffold_2111_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4029..4499)
DNA (471bp) protein (157aa)
50S ribosomal protein L13 n=1 Tax=Rhodovulum sp. PH10 RepID=J5PDY5_9RHOB
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
SCNpilot_cont_1000_p_scaffold_2111_5
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4684..5622
DNA (939bp) protein (313aa)
ISSpo8, transposase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUD7_RHOP2
Transposase {ECO:0000313|EMBL:KAI96266.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
ISSpo8, transposase
SCNpilot_cont_1000_p_scaffold_2111_6

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5799..6260
DNA (462bp) protein (154aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=M8KMN3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KKM60716.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative phage-associated protein
SCNpilot_cont_1000_p_scaffold_2111_7

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6358..6660
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Klebsiella RepID=M7PU64_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:KKM60717.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2111_8
unknown

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6657..6812
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2111_9
unknown

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comp(7073..7708)
DNA (636bp) protein (212aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2111_10
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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comp(7759..8859)
DNA (1101bp) protein (367aa)
Fatty acid desaturase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2Y2_9CYAN
fatty acid desaturase
Fatty acid desaturase {ECO:0000313|EMBL:AFY76389.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
SCNpilot_cont_1000_p_scaffold_2111_11
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8977..9444
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHC9_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB95914.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_1000_p_scaffold_2111_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9509..10306
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214E3_RHOPB
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABD88243.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_1000_p_scaffold_2111_13
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10306..10836
DNA (531bp) protein (177aa)
CoA-binding domain protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HYY3_RHOVT
CoA-binding protein; K06929
CoA-binding domain protein {ECO:0000313|EMBL:ADP70958.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_cont_1000_p_scaffold_2111_14
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10833..11441
DNA (609bp) protein (203aa)
glutathione S-transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C5D9_HYPNA
Glutathione S-transferase {ECO:0000313|EMBL:KCZ98037.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
SCNpilot_cont_1000_p_scaffold_2111_15
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11453..12721
DNA (1269bp) protein (423aa)
O-acetylhomoserine aminocarboxypropyltransferase; K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] rbh
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ABS64540.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ABS64540.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXA7_PARL1 rbh
SCNpilot_cont_1000_p_scaffold_2111_16
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12718..13758)
DNA (1041bp) protein (347aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Rule:MF_01665}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
Heme A synthase n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PKT7_PSEUV
Cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15
SCNpilot_cont_1000_p_scaffold_2111_17
unknown

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13824..14039
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2111_18
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

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14036..14299
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VEN7_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH96960.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_cont_1000_p_scaffold_2111_19
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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14401..15915
DNA (1515bp) protein (505aa)
Amino acid transporter n=1 Tax=Caulobacter sp. AP07 RepID=J2ZV17_9CAUL rbh
Amino acid transporter {ECO:0000313|EMBL:EJL22519.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family rbh
SCNpilot_cont_1000_p_scaffold_2111_20
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15919..16425)
DNA (507bp) protein (169aa)
homoserine O-acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=198628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).;"
Homoserine O-acetyltransferase n=1 Tax=Dickeya dadantii (strain 3937) RepID=E0SIA1_DICD3
Displaying 20 items

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