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SCNpilot_cont_1000_p_scaffold_2576

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2576_1
Acidicaldus sp. USBA-GBX-499, Acidicaldus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..302)
DNA (300bp) protein (100aa)
Esterase {ECO:0000313|EMBL:AIE44670.1}; EC=3.1.1.1 {ECO:0000313|EMBL:AIE44670.1};; TaxID=1518503 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidicaldus.;" source="Acidicaldus sp. USBA-GBX-499.;"
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=G3CRD6_9ZZZZ
lipase
SCNpilot_cont_1000_p_scaffold_2576_2
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

408..1340
DNA (933bp) protein (311aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T0E9_CAUSK rbh
glyoxalase/bleomycin resistance protein/dioxygenase rbh
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABZ70595.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_1000_p_scaffold_2576_3
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1361..2251
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003647316
Trehalose utilization rbh
Trehalose utilization {ECO:0000313|EMBL:AFL89029.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_1000_p_scaffold_2576_4
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2252..3244)
DNA (993bp) protein (331aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB; 2198 / 1H9).;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V484_HALED
SCNpilot_cont_1000_p_scaffold_2576_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3529..4473
DNA (945bp) protein (315aa)
Rare lipoprotein A n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXT2_PARL1
rare lipoprotein A; K03642 rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ABS64715.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_2576_6
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4488..5642
DNA (1155bp) protein (385aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EFH09047.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EFH09047.1};; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Serine-type D-Ala-D-Ala carboxypeptidase (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RUH1_9PROT
dacC; D-alanyl-D-alanine carboxypeptidase
SCNpilot_cont_1000_p_scaffold_2576_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5645..6271
DNA (627bp) protein (209aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7P4_AZOL4
SCNpilot_cont_1000_p_scaffold_2576_8
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6279..7334
DNA (1056bp) protein (352aa)
DNA replication ATPase; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III subunit delta n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZU00_9PROT
DNA replication ATPase {ECO:0000313|EMBL:GAK46754.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_cont_1000_p_scaffold_2576_9
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7335..8117
DNA (783bp) protein (261aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] rbh
Mg-dependent DNase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z913_9PROT rbh
Mg-dependent DNase {ECO:0000313|EMBL:EME70850.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
SCNpilot_cont_1000_p_scaffold_2576_10
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8128..8934
DNA (807bp) protein (269aa)
PhnP n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B726B0
Metal-dependent hydrolase of the beta-lactamase superfamily I, PhnP protein {ECO:0000313|EMBL:EYD77756.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
beta-lactamase-like protein; K06167 PhnP protein
SCNpilot_cont_1000_p_scaffold_2576_11
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8940..9902)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4FEC8
Uncharacterized protein {ECO:0000313|EMBL:AJR23588.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2576_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9912..10871)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9V6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJP74522.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2576_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10928..12148)
DNA (1221bp) protein (407aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Dihydrodipicolinate synthetase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024Z1_SOLUE
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ABJ83435.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_p_scaffold_2576_14
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12254..13315
DNA (1062bp) protein (354aa)
Inosose dehydratase {ECO:0000313|EMBL:CDL90560.1}; EC=4.2.1.44 {ECO:0000313|EMBL:CDL90560.1};; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
xylose isomerase; K03335 inosose dehydratase [EC:4.2.1.44]
xylose isomerase n=1 Tax=Rudanella lutea RepID=UPI00036190EC
SCNpilot_cont_1000_p_scaffold_2576_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

13357..13800
DNA (444bp) protein (148aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
SCNpilot_cont_1000_p_scaffold_2576_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

13802..15832
DNA (2031bp) protein (677aa)
Pyrrolo-quinoline quinone n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KQF5_9GAMM
pyrrolo-quinoline quinone
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
SCNpilot_cont_1000_p_scaffold_2576_17
unknown

Not on your lists

comp(15843..16328)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2576_18
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16381..17337)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KHP0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB32823.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2576_19
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17763..18371)
DNA (609bp) protein (203aa)
Type IV pilus assembly PilZ n=8 Tax=Rhizobium meliloti RepID=F6BWC6_SINMB
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:AEH79417.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_cont_1000_p_scaffold_2576_20
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18560..19543
DNA (984bp) protein (328aa)
Hemolysin-type calcium-binding region (Fragment) n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LGH1_9PROT
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:AJD50698.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
Displaying 20 items

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