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SCNpilot_cont_1000_p_scaffold_2707

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2707_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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46..747
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T028_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ73518.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_1000_p_scaffold_2707_2
unknown

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780..1004
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2707_3
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1041..1577)
DNA (537bp) protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:AJF05566.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
Uncharacterized protein-like protein id=2027313 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ErfK/YbiS/YcfS/YnhG protein
SCNpilot_cont_1000_p_scaffold_2707_4
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1677..2612)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMG3_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK53951.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_1000_p_scaffold_2707_5
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2718..3029)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368F038
lipoprotein, putative
Lipoprotein, putative {ECO:0000313|EMBL:ACK78379.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
SCNpilot_cont_1000_p_scaffold_2707_6
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3307..3489
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I045_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE98601.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2707_7
unknown

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3535..3765
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2707_8
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3860..5077)
DNA (1218bp) protein (406aa)
glucose sorbosone dehydrogenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5DF1D
glucose sorbosone dehydrogenase
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:ADV83545.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
SCNpilot_cont_1000_p_scaffold_2707_9
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5191..7740)
DNA (2550bp) protein (850aa)
ATPase, E1-E2 type; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] rbh
ATPase, E1-E2 type n=1 Tax=Cellvibrio sp. BR RepID=I3IED2_9GAMM rbh
ATPase, E1-E2 type {ECO:0000313|EMBL:EIK46417.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
SCNpilot_cont_1000_p_scaffold_2707_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7850..8389
DNA (540bp) protein (180aa)
Putative Cytochrome b561 family protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APV1_AZOBR
Strain MEJ076 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIP97665.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
putative Cytochrome b561 family protein
SCNpilot_cont_1000_p_scaffold_2707_11
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8491..9732
DNA (1242bp) protein (414aa)
membrane protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E846E8
Major Facilitator Superfamily protein {ECO:0000313|EMBL:AJZ62566.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
major facilitator superfamily protein; K13021 MFS transporter, ACS family, tartrate transporter
SCNpilot_cont_1000_p_scaffold_2707_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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9856..12468
DNA (2613bp) protein (871aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T26_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87194.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_p_scaffold_2707_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12475..13314)
DNA (840bp) protein (280aa)
UPI0003CFDB04 related cluster n=1 Tax=unknown RepID=UPI0003CFDB04
Metal-binding protein {ECO:0000313|EMBL:ESZ20625.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2707_14
unknown

Not on your lists

comp(13318..13392)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 14 items

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