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SCNpilot_cont_1000_p_scaffold_2728

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2728_1
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..335)
DNA (333bp) protein (111aa)
TonB-dependent receptor n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZW9_9PROT
TonB-dependent receptor {ECO:0000313|EMBL:EGY01187.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
TonB-dependent receptor
SCNpilot_cont_1000_p_scaffold_2728_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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453..1781
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036DC14C
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:AGK58036.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_1000_p_scaffold_2728_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1778..2407
DNA (630bp) protein (210aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZK9_9PROT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EGY01301.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
LuxR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_2728_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3041..3682
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR49_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62382.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_2728_5
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3679..5235)
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000375D80E rbh
Putative Glucans biosynthesis protein D 2 {ECO:0000313|EMBL:CDI01435.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
mdoD; glucan biosynthesis protein D; K03670 periplasmic glucans biosynthesis protein
SCNpilot_cont_1000_p_scaffold_2728_6
unknown

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5403..5636
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2728_7
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5629..7536
DNA (1908bp) protein (636aa)
Glucosyltransferase MdoH n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UC98_MYXSD rbh
glucosyltransferase MdoH rbh
Glucosyltransferase MdoH {ECO:0000313|EMBL:AGC44089.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCNpilot_cont_1000_p_scaffold_2728_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7599..9152
DNA (1554bp) protein (518aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55); K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
alpha-L-arabinofuranosidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035C4E55
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:AIT06052.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_1000_p_scaffold_2728_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9262..10392)
DNA (1131bp) protein (377aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3] rbh
aldose 1-epimerase n=1 Tax=Sphingomonas elodea RepID=UPI0002631E49 rbh
SCNpilot_cont_1000_p_scaffold_2728_10
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10406..12142)
DNA (1737bp) protein (579aa)
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EGO96106.1}; EC=1.1.2.7 {ECO:0000313|EMBL:EGO96106.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Pyrrolo-quinoline quinone n=3 Tax=Acidiphilium RepID=A5FYU4_ACICJ rbh
putative pyrrolo-quinoline quinone rbh
SCNpilot_cont_1000_p_scaffold_2728_11
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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12268..13203
DNA (936bp) protein (312aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15]
ribokinase n=1 Tax=Streptomyces sp. CNT372 RepID=UPI00037D6176
Ribokinase {ECO:0000313|EMBL:KJK43036.1}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
Displaying 11 items

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