ggKbase home page

SCNpilot_cont_1000_p_scaffold_4437

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4437_1
unknown

Not on your lists

1..210
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4437_2
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191..505
DNA (315bp) protein (105aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
phhB; pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SDP4_9BURK
SCNpilot_cont_1000_p_scaffold_4437_3
unknown

Not on your lists

659..829
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4437_4
unknown

Not on your lists

comp(826..957)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4437_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(989..2923)
DNA (1935bp) protein (645aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
acetate--CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
Acetyl-coenzyme A synthetase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=ACSA_PARL1
SCNpilot_cont_1000_p_scaffold_4437_6
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2994..3740
DNA (747bp) protein (249aa)
amidase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B40AD0
Creatininase {ECO:0000313|EMBL:KCZ88474.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jannaschiana VP2.;"
creatininase
SCNpilot_cont_1000_p_scaffold_4437_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3892..5706
DNA (1815bp) protein (605aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Phosphomethylpyrimidine synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K4B8_9PROT
thiC; thiamine biosynthesis protein ThiC (5'-phosphoryl-5-aminoimidazole, 4-amino-5-hydroxymethyl-2-methylpyrimidine-P)
SCNpilot_cont_1000_p_scaffold_4437_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5845..6399)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FH95_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV15715.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4437_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

6594..7781
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287D77C rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCNpilot_cont_1000_p_scaffold_4437_10
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7865..8776
DNA (912bp) protein (304aa)
UPI0003CEC09D related cluster n=1 Tax=unknown RepID=UPI0003CEC09D rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:ESY90751.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
putative hydrolase or acyltransferase of alpha/beta superfamily rbh
SCNpilot_cont_1000_p_scaffold_4437_11
unknown

Not on your lists

8773..9123
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 11 items

View Taxonomy