name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_1280_1
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..288
|
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase n=1 Tax=Maricaulis maris (strain MCS10) RepID=APT_MARMM
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
|
|
SCNpilot_cont_1000_p_scaffold_1280_2
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
291..887
|
Glutathione S-transferase domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKB7_METNO
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain protein {ECO:0000313|EMBL:ACL61902.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
913..1995
|
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
translation initiation factor, aIF-2BI family (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
Methylthioribose-1-phosphate isomerase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SIH0_9RHIZ
|
|
SCNpilot_cont_1000_p_scaffold_1280_4
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2010..4067
|
Hypothetical oxidoreductase yuxG n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAP0_MAGSA
rbh
short chain dehydrogenase
rbh
Hypothetical oxidoreductase yuxG {ECO:0000313|EMBL:BAE49085.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4216..6063)
|
superfamily II DNA/RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Superfamily II DNA/RNA helicase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SAW6_PHAFV
rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:KFC73806.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6189..7286)
|
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000360CCC0
rbh
GTP-dependent nucleic acid-binding protein EngD; K06942
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7286..7927)
|
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Peptidyl-tRNA hydrolase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3J7_9PROT
|
|
SCNpilot_cont_1000_p_scaffold_1280_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7999..8676)
|
50S ribosomal protein L25 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NT79_AFIFE
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25
|
|
SCNpilot_cont_1000_p_scaffold_1280_9
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8830..9228
|
UPI0003CE0E84 related cluster n=1 Tax=unknown RepID=UPI0003CE0E84
Uncharacterized protein {ECO:0000313|EMBL:ESW80308.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1280_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9239..10198)
|
ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibacu
Ribose-phosphate pyrophosphokinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVD9_PARL1
|
|
SCNpilot_cont_1000_p_scaffold_1280_11
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10367..11143)
|
Uncharacterized protein, YfiH family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPE1_9RHIZ
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein; K05810 conserved hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1280_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11140..12234)
|
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000360A25A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63875.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_13
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12242..13120)
|
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIE7_XANP2
|
|
SCNpilot_cont_1000_p_scaffold_1280_14
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13235..13498
|
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVE4_PARL1
Conserved protein {ECO:0000313|EMBL:GAK45957.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1280_15
bacterium YEK0313, Bacteria
|
Not on your lists |
13687..14193
|
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4T9M1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ14441.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1280_16
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14282..15046
|
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000378F85C
|
|
SCNpilot_cont_1000_p_scaffold_1280_17
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15218..16606)
|
integral membrane sensor signal transduction histidine kinase; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIF8_XANP2
|
|
SCNpilot_cont_1000_p_scaffold_1280_18
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16630..17406)
|
Two component transcriptional regulator, winged helix family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF0_PARL1
two component transcriptional regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS63883.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_19
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17472..18365
|
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Branched-chain amino acid aminotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF2_PARL1
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:GAK45965.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18369..19256)
|
DMT transporter permease n=1 Tax=Afipia birgiae RepID=UPI00031CA7C3
Uncharacterized protein {ECO:0000313|EMBL:EGP09736.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1280_21
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19264..19893)
|
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ABS63889.1}; EC=2.7.8.5 {ECO:0000313|EMBL:ABS63889.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF6_PARL1
|
|
SCNpilot_cont_1000_p_scaffold_1280_22
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19950..21812)
|
UvrABC system protein C n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RIU9_9RHIZ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
|
|
SCNpilot_cont_1000_p_scaffold_1280_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22163..22735)
|
PadR family transcripitonal regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488FAA
putative PadR family transcriptional regulator
Putative PadR family transcriptional regulator {ECO:0000313|EMBL:AGH51347.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_24
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22860..23252)
|
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25]
Dihydroneopterin aldolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVF8_PARL1
Dihydroneopterin aldolase {ECO:0000313|EMBL:ABS63891.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
|
|
SCNpilot_cont_1000_p_scaffold_1280_25
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23263..24012)
|
Product n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S2V7_9RHOB
short-chain dehydrogenase/reductase SDR
Product {ECO:0000313|EMBL:EPX84520.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
|
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SCNpilot_cont_1000_p_scaffold_1280_26
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24062..24970)
|
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Tryptophan--tRNA ligase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFM4_HYPSM
|