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SCNpilot_cont_1000_p_scaffold_1315

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1315_1
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1871
DNA (1869bp) protein (623aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288FE91 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM96788.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
putative TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_1000_p_scaffold_1315_2
unknown

Not on your lists

1861..2082
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1315_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2085..2537
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PVJ4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:GAN77397.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
conserved hypothetical protein; putative exported protein
SCNpilot_cont_1000_p_scaffold_1315_4
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2597..3160
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI0003772C1B
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1315_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3164..3796)
DNA (633bp) protein (211aa)
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQB5_PARL1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS62098.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_1315_6
unknown

Not on your lists

comp(3842..4207)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1315_7
unknown

Not on your lists

comp(4332..5006)
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1315_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5087..6151)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APT6_AZOBR
Methyltransferase {ECO:0000313|EMBL:AIB13813.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
conserved protein of unknown function; putative methyltransferase and TPR domains
SCNpilot_cont_1000_p_scaffold_1315_9
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6148..7032)
DNA (885bp) protein (295aa)
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQD0_PARL1
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase {ECO:0000313|EMBL:GAK45617.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase
SCNpilot_cont_1000_p_scaffold_1315_10
unknown

Not on your lists

7150..7632
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1315_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7660..9033
DNA (1374bp) protein (458aa)
peptide transporter n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B558BB rbh
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
Amino acid/peptide transporter {ECO:0000313|EMBL:ACG78220.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_1000_p_scaffold_1315_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9030..10850)
DNA (1821bp) protein (607aa)
cyclic nucleotide-binding protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A76665 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF46397.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
cyclic nucleotide-binding protein rbh
SCNpilot_cont_1000_p_scaffold_1315_13
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10876..11655)
DNA (780bp) protein (260aa)
short-chain dehydrogenase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B64394
Uncharacterized protein {ECO:0000313|EMBL:KGN36914.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_p_scaffold_1315_14
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11879..13120
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DQU2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU81102.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
SCNpilot_cont_1000_p_scaffold_1315_15
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13211..13768
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S6W4_9BURK
Membrane protein {ECO:0000313|EMBL:KDP86732.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1315_16
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13812..15020
DNA (1209bp) protein (403aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQD4_PARL1
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAK45622.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_cont_1000_p_scaffold_1315_17
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15020..15721
DNA (702bp) protein (234aa)
SCP-like extracellular n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQA0_PARL1
hypothetical protein
SCP-like extracellular {ECO:0000313|EMBL:ABS62083.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_1315_18
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

16032..18512
DNA (2481bp) protein (827aa)
Sel1 repeat-containing protein (EC:3.5.2.6); K13582 localization factor PodJL
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003B3FA72
Uncharacterized protein {ECO:0000313|EMBL:KIF12572.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
SCNpilot_cont_1000_p_scaffold_1315_19
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18637..19554
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXM5_9RHOB
Membrane protein, putative {ECO:0000313|EMBL:CDO60167.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein; K07090
SCNpilot_cont_1000_p_scaffold_1315_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19551..20306
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LSD0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM32851.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1315_21
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20303..21013)
DNA (711bp) protein (237aa)
Metallophosphoesterase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LVA4_METRJ
metallophosphoesterase; K06953
Metallophosphoesterase {ECO:0000313|EMBL:ACB22549.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_1000_p_scaffold_1315_22
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20994..23447)
DNA (2454bp) protein (818aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/H associated domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ93_PARL1
DEAD/H associated domain protein {ECO:0000313|EMBL:ABS62076.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_1315_23
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23495..24220)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Loktanella hongkongensis RepID=UPI0003789C22
CarD family transcriptional regulator {ECO:0000313|EMBL:KFG66501.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1315_24
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24220..25212)
DNA (993bp) protein (331aa)
Alpha/beta hydrolase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X318_9RHIZ
Alpha/beta hydrolase {ECO:0000313|EMBL:ERI15204.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_1000_p_scaffold_1315_25
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25277..25651
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YP63_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW37285.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1315_26
unknown

Not on your lists

25662..26009
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1315_27
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26020..27435)
DNA (1416bp) protein (472aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
OtsA trehalose-6-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HPR0_PSEUO rbh
SCNpilot_cont_1000_p_scaffold_1315_28
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27417..29204)
DNA (1788bp) protein (596aa)
Glycoside hydrolase 15-related protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SN66_NITWN
glycoside hydrolase 15-related
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ABA06275.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_1000_p_scaffold_1315_29
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29201..29932)
DNA (732bp) protein (244aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
Trehalose-phosphatase (Trehalose 6-phosphate phosphatase) (TPP) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZF3_9BRAD
trehalose-phosphatase
Displaying 29 items

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