ggKbase home page

SCNpilot_cont_1000_p_scaffold_1333

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1333_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Signal transduction histidine kinase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EPZ1_CAUCE
two component sensor histidine kinase
SCNpilot_cont_1000_p_scaffold_1333_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(575..1258)
DNA (684bp) protein (228aa)
Response regulator in two-component regulatory system with CusS, regulation of copper resistance n=3 Tax=Methylobacterium extorquens RepID=C5B343_METEA
cusR; response regulator in two-component regulatory system with CusS, regulation of copper resistance; K02483 two-component system, OmpR family, response regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_1000_p_scaffold_1333_3
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1464..3824
DNA (2361bp) protein (787aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0ESF3_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83912.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
TonB-dependent outer membrane receptor FecA5; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_1000_p_scaffold_1333_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3836..4525
DNA (690bp) protein (230aa)
acid phosphatase; K09474 acid phosphatase (class A) [EC:3.1.3.2]
putative acid phosphatase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC12A
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:EZP52700.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_cont_1000_p_scaffold_1333_5
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4626..5246)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2SGL3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EMD84515.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
SCNpilot_cont_1000_p_scaffold_1333_6
uncultured Gemmatimonadales bacterium HF0770_11C06, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5276..7696)
DNA (2421bp) protein (807aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003762BED rbh
Glucose dehydrogenase {ECO:0000313|EMBL:ADI23204.1}; TaxID=723616 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; environmental samples.;" source="uncultured Gemmatimonadales bacterium HF0770_11C06.;"
pyrrolo-quinoline quinone rbh
SCNpilot_cont_1000_p_scaffold_1333_7
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7732..8757)
DNA (1026bp) protein (342aa)
Amidohydrolase 2 n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7CNL3_RHOBT rbh
Amidohydrolase 2 {ECO:0000313|EMBL:ELP35435.1}; TaxID=993516 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SWK14.;"
hypothetical protein; K07046 rbh
SCNpilot_cont_1000_p_scaffold_1333_8
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9083..11956
DNA (2874bp) protein (958aa)
TonB-dependent receptor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGL8_PHEZH
TonB-dependent receptor {ECO:0000313|EMBL:KGB52164.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_1000_p_scaffold_1333_9
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12056..12805
DNA (750bp) protein (250aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGC9_CAUST rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADG10248.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_1000_p_scaffold_1333_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13033..13803
DNA (771bp) protein (257aa)
IclR family transcriptional regulator n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IF63_PSEPS
IclR family transcriptional regulator {ECO:0000313|EMBL:CDM42154.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
IclR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1333_11
unknown

Not on your lists

13994..14989
DNA (996bp) protein (332aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1333_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15066..16436
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E78FA
Uncharacterized protein {ECO:0000313|EMBL:EDY16616.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1333_13
unknown

Not on your lists

16629..16943
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1333_14
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16995..17837
DNA (843bp) protein (281aa)
Transcriptional regulator, IclR family n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGC6_CAUST rbh
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADG10245.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_1000_p_scaffold_1333_15
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(17874..18167)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000371F964
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AIZ44743.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
antibiotic biosynthesis monooxygenase; K07145
SCNpilot_cont_1000_p_scaffold_1333_16
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18164..19480)
DNA (1317bp) protein (439aa)
Major facilitator transporter n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WZ23_9RHIZ
Major facilitator transporter {ECO:0000313|EMBL:EIZ85798.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
major facilitator transporter
SCNpilot_cont_1000_p_scaffold_1333_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19465..20343)
DNA (879bp) protein (293aa)
2-hydroxy-3-oxopropionate reductase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSJ1_9RHIZ rbh
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EIM26933.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_1000_p_scaffold_1333_18
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20340..21254)
DNA (915bp) protein (305aa)
Putative amidohydrolase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHQ5_MOBAS rbh
Putative amidohydrolase {ECO:0000313|EMBL:EAS49524.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein; K07046 rbh
SCNpilot_cont_1000_p_scaffold_1333_19
unknown

Not on your lists

21530..21775
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1333_20
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21772..22962)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J7P5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB32862.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1333_21
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23131..23868
DNA (738bp) protein (246aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Displaying 21 items

View Taxonomy