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SCNpilot_cont_1000_p_scaffold_1672

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1672_1
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..329
DNA (327bp) protein (109aa)
sorbosone dehydrogenase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00038169BC
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:EIG62938.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
putative glucose/sorbosone dehydrogenase
SCNpilot_cont_1000_p_scaffold_1672_2
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218..2272)
DNA (2055bp) protein (685aa)
Transcriptional initiation protein Tat n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4NPC0_9CAUL rbh
Transcriptional initiation protein Tat {ECO:0000313|EMBL:ESQ83627.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1672_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2461..4452)
DNA (1992bp) protein (664aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036359A5 rbh
hypothetical protein; K09955 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ82236.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_p_scaffold_1672_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4712..5869
DNA (1158bp) protein (386aa)
Gluconate 2-dehydrogenase cytochrome c subunit {ECO:0000313|EMBL:CDX52080.1}; EC=1.1.99.3 {ECO:0000313|EMBL:CDX52080.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Cytochrome C n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RN83_9PROT
gluconate 2-dehydrogenase
SCNpilot_cont_1000_p_scaffold_1672_5
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5871..6563)
DNA (693bp) protein (231aa)
FixP1 Di-heme cytochrome c n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SBG3_9BRAD
FixP1 Di-heme cytochrome c {ECO:0000313|EMBL:CCD91540.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
di-heme cytochrome c
SCNpilot_cont_1000_p_scaffold_1672_6
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6560..8362)
DNA (1803bp) protein (601aa)
PQQ-dependent dehydrogenase; K00114 alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] rbh
PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QBF4_9BRAD rbh
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:EIG57110.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_cont_1000_p_scaffold_1672_7
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8359..8982)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0I1G7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB05510.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein; K02351 putative membrane protein
SCNpilot_cont_1000_p_scaffold_1672_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8970..9398)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ES70_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52285.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_1000_p_scaffold_1672_9
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9395..10003)
DNA (609bp) protein (203aa)
cytochrome c oxidase subunit III (fragment); K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Putative cytochrome c oxidase subunit III n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMX1_MOBAS
Putative cytochrome c oxidase subunit III {ECO:0000313|EMBL:EAS51260.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCNpilot_cont_1000_p_scaffold_1672_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9996..11960)
DNA (1965bp) protein (655aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome-c oxidase {ECO:0000313|EMBL:ABB73767.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABB73767.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Cytochrome-c oxidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBV4_NITMU
SCNpilot_cont_1000_p_scaffold_1672_11
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11974..12984)
DNA (1011bp) protein (337aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] rbh
Putative cytochrome oxidase subunit II n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMW9_MOBAS rbh
Putative cytochrome oxidase subunit II {ECO:0000313|EMBL:EAS51262.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCNpilot_cont_1000_p_scaffold_1672_12
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13706..14905
DNA (1200bp) protein (400aa)
cyclopropane fatty acyl phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane fatty acyl phospholipid synthase n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AGD7_BURGB
Putative cyclopropane-fatty-acyl-phospholipidsynthase protein {ECO:0000313|EMBL:AJK46444.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
SCNpilot_cont_1000_p_scaffold_1672_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15095..15613)
DNA (519bp) protein (173aa)
DNA-binding protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7B0D6
putative DNA-binding protein with PD1-like DNA-binding motif
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_1000_p_scaffold_1672_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15634..16011)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H328_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF84177.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1672_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16023..17954)
DNA (1932bp) protein (644aa)
thiamine pyrophosphate binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HIA7_9BRAD rbh
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:ERF84176.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_1000_p_scaffold_1672_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17997..19004)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EB3E06
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_1000_p_scaffold_1672_17
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19037..19882)
DNA (846bp) protein (282aa)
HpcH/HpaI aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J4I5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB32861.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
SCNpilot_cont_1000_p_scaffold_1672_18
bacterium YEK0313, Bacteria

Not on your lists

20280..21272
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000308462F
Acetoin catabolism regulatory protein {ECO:0000313|EMBL:CEJ13749.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1672_19
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21415..21939
DNA (525bp) protein (175aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WVJ8_OCHA4
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABS13002.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Displaying 19 items

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