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SCNpilot_cont_1000_p_scaffold_7763

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7763_1
unknown

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2..79
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7763_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(830..1168)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237DC5D
Uncharacterized protein {ECO:0000313|EMBL:ESW89847.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
protein of unknown function DUF262
SCNpilot_cont_1000_p_scaffold_7763_3
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1532..1837
DNA (306bp) protein (102aa)
Excinuclease ABC subunit C n=1 Tax=Ahrensia sp. R2A130 RepID=E0MKF5_9RHOB
Excinuclease ABC subunit C {ECO:0000313|EMBL:EFL90284.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
excinuclease ABC subunit C
SCNpilot_cont_1000_p_scaffold_7763_4
unknown

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comp(2039..2176)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7763_5
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2266..3030)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R4G4_RALPI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EYD74271.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_7763_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3147..4796)
DNA (1650bp) protein (550aa)
molecular chaperone GroEL n=1 Tax=Hoeflea sp. 108 RepID=UPI0003678B97
chaperonin GroEL; K04077 chaperonin GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_7763_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4844..5146)
DNA (303bp) protein (101aa)
10 kDa chaperonin n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNJ4_9PROT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
groES; co-chaperonin GroES
SCNpilot_cont_1000_p_scaffold_7763_8
unknown

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comp(5374..5553)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7763_9
unknown

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6057..6968
DNA (912bp) protein (304aa)
CRE-GRSP-1 protein n=1 Tax=Caenorhabditis remanei RepID=E3N6H7_CAERE
SCNpilot_cont_1000_p_scaffold_7763_10
unknown

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6999..7676
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7763_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7826..9262
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF72_9BACT
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_7763_12
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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9289..10596
DNA (1308bp) protein (436aa)
Diguanylate phosphodiesterase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPQ8_PARL1
Uncharacterized protein {ECO:0000313|EMBL:CDO60374.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
diguanylate phosphodiesterase; K13593 cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF
Displaying 12 items

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