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SCNpilot_cont_1000_p_scaffold_5081

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5081_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..588
DNA (588bp) protein (196aa)
Phosphoribosyltransferase n=2 Tax=Rhodospirillum rubrum RepID=G2TBI2_RHORU
phosphoribosyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_1000_p_scaffold_5081_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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618..872
DNA (255bp) protein (85aa)
glutaredoxin n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A903
Glutaredoxin 3 {ECO:0000313|EMBL:GAK45397.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Glutaredoxin-related protein
SCNpilot_cont_1000_p_scaffold_5081_3
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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973..1521
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TDE0_RICCO
Uncharacterized protein {ECO:0000313|EMBL:ETY77456.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5081_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1531..2355
DNA (825bp) protein (275aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J332_POLGS
Amidohydrolase {ECO:0000313|EMBL:EWY42763.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
SCNpilot_cont_1000_p_scaffold_5081_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2444..2857
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTX5_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63358.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_5081_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2970..3635)
DNA (666bp) protein (222aa)
Putative integral membrane protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKL5_TISMK
Putative integral membrane protein {ECO:0000313|EMBL:CDX52070.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5081_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3674..4501)
DNA (828bp) protein (276aa)
ubiquinone biosynthesis O-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
Ubiquinone biosynthesis O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00472}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000255|HAMAP-Rule:MF_00472}; EC=2.1.1.222 {ECO:0000255|HAMAP-Rule:MF_00472};; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00472}; EC=2.1.1.64 {ECO:0000255|HAMAP-Rule:MF_00472};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=UBIG_PARL1
SCNpilot_cont_1000_p_scaffold_5081_8
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4515..5762
DNA (1248bp) protein (416aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
Aspartokinase n=2 Tax=Rhodospirillum rubrum RepID=G2TBI8_RHORU
SCNpilot_cont_1000_p_scaffold_5081_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5955..8162
DNA (2208bp) protein (736aa)
phosphoenolpyruvate-protein phosphotransferase PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
PTSINtr with GAF domain, PtsP n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTY0_PARL1
PTSINtr with GAF domain, PtsP {ECO:0000313|EMBL:ABS63363.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_5081_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8291..9322
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTY1_PARL1
hypothetical protein; K15539 cytoskeleton protein RodZ
Uncharacterized protein {ECO:0000313|EMBL:ABS63364.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_5081_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9332..10471
DNA (1140bp) protein (380aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTY2_PARL1 rbh
SCNpilot_cont_1000_p_scaffold_5081_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10546..11628
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=2 Tax=Bradyrhizobiaceae RepID=F7QGR0_9BRAD
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
SCNpilot_cont_1000_p_scaffold_5081_13
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11625..12440
DNA (816bp) protein (272aa)
hemK; protein methyltransferase HemK (EC:2.1.1.-); K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphili
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Xanthobacteraceae RepID=UPI00036EAF72
SCNpilot_cont_1000_p_scaffold_5081_14
Komagataeibacter rhaeticus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12682..13116
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3SF41_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KDU94609.1}; TaxID=1432055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter rhaeticus AF1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5081_15
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13267..15564
DNA (2298bp) protein (766aa)
Chaperone protein ClpB n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QM69_METSZ
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034, ECO:0000313|EMBL:CCJ06273.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
clpB; chaperone protein ClpB
Displaying 15 items

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