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SCNpilot_cont_1000_p_scaffold_5154

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5154_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..839)
DNA (837bp) protein (279aa)
Protein RecA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RECA_PARL1
recA protein; K03553 recombination protein RecA
Protein RecA {ECO:0000255|HAMAP-Rule:MF_00268}; Recombinase A {ECO:0000255|HAMAP-Rule:MF_00268}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_5154_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1916..2524)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6IZ93_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10310.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5154_3
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2700..3314
DNA (615bp) protein (205aa)
Phospholipid-binding protein PBP family n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SHU7_9BURK
Phospholipid-binding protein PBP family {ECO:0000313|EMBL:EHP37872.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
phospholipid-binding protein PBP family; K06910
SCNpilot_cont_1000_p_scaffold_5154_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3341..4459
DNA (1119bp) protein (373aa)
aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3]
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Aldose 1-epimerase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028V2_SOLUE
SCNpilot_cont_1000_p_scaffold_5154_5
unknown

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4485..4841
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5154_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(4991..6013)
DNA (1023bp) protein (341aa)
HpcH/HpaI aldolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X10_SOLUE
HpcH/HpaI aldolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_1000_p_scaffold_5154_7
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6174..7268
DNA (1095bp) protein (365aa)
aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3]
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
Aldose 1-epimerase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HBF6_GLUDA
SCNpilot_cont_1000_p_scaffold_5154_8
unknown

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comp(7274..7639)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5154_9
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7896..8156)
DNA (261bp) protein (87aa)
sensory box histidine kinase/response regulator; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003701112
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:CDO58495.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Displaying 9 items

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