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SCNpilot_cont_1000_p_scaffold_237

Search features with annotation key words

Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_237_1
Mycobacterium sp. VKM Ac-1817D, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

239..730
DNA (492bp) protein (164aa)
SMC domain protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VXN7_MYCFO
Uncharacterized protein {ECO:0000313|EMBL:AIY47267.2}; TaxID=1273687 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. VKM Ac-1817D.;"
SCNpilot_cont_1000_p_scaffold_237_2
unknown

Not on your lists

933..1439
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_237_3
unknown

Not on your lists

comp(1674..1781)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_237_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1775..2782)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KD90_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL38573.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_237_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2764..3858)
DNA (1095bp) protein (365aa)
Phytochrome-like protein cph1 {ECO:0000313|EMBL:KJL38574.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL38574.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Signal transduction histidine kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAZ8_MICTS
signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_237_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3930..4346)
DNA (417bp) protein (139aa)
Arsenate-mycothiol transferase ArsC2 {ECO:0000313|EMBL:KJL38575.1}; EC=2.8.4.2 {ECO:0000313|EMBL:KJL38575.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Protein-tyrosine phosphatase, low molecular weight; K03741 arsenate reductase [EC:1.20.4.1]
Heat-shock protein HtpX n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LSV5_9MICO
SCNpilot_cont_1000_p_scaffold_237_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4343..4861)
DNA (519bp) protein (173aa)
N-acyltransferase YncA {ECO:0000313|EMBL:KJL38576.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL38576.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative phosphinothricin N-acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030C5C14
SCNpilot_cont_1000_p_scaffold_237_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4858..6165)
DNA (1308bp) protein (436aa)
Ferredoxin--NADP reductase {ECO:0000313|EMBL:KJL38577.1}; EC=1.18.1.2 {ECO:0000313|EMBL:KJL38577.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EFA41B
FAD dependent oxidoreductase rbh
SCNpilot_cont_1000_p_scaffold_237_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6248..6592
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LD94_9MICO
Arsenical resistance operon repressor {ECO:0000313|EMBL:KJL38578.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_237_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6644..6745)
DNA (102bp) protein (34aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL38579.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_237_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6776..7063)
DNA (288bp) protein (96aa)
Regulated in copper repressor n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LAY7_9MICO
Copper-sensing transcriptional repressor CsoR {ECO:0000313|EMBL:KJL38580.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_237_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7180..7815
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003830B94
Uncharacterized protein {ECO:0000313|EMBL:KJL38581.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_237_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7853..10054
DNA (2202bp) protein (734aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI0003725770 rbh
Copper transport protein YcnJ {ECO:0000313|EMBL:KJL38583.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
copC; Copper resistance protein
SCNpilot_cont_1000_p_scaffold_237_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10062..10889)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B3E40C
Protease HtpX {ECO:0000313|EMBL:KJL38584.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_237_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10892..11263)
DNA (372bp) protein (124aa)
transcriptional regulator n=1 Tax=Ruania albidiflava RepID=UPI0003B5DAF9
Transcriptional regulator BlaI {ECO:0000313|EMBL:KJL38585.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K07737 putative transcriptional regulator
SCNpilot_cont_1000_p_scaffold_237_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11404..11625
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00036109F5
Heavy-metal-associated domain protein {ECO:0000313|EMBL:KJL38586.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
heavy metal transport/detoxification protein
SCNpilot_cont_1000_p_scaffold_237_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11622..13748
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003607B09 rbh
Cytochrome c oxidase caa3 assembly factor (Caa3-CtaG) {ECO:0000313|EMBL:KJL38587.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
copper resistance protein D rbh
SCNpilot_cont_1000_p_scaffold_237_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13745..16000
DNA (2256bp) protein (752aa)
Copper-exporting P-type ATPase A {ECO:0000313|EMBL:KJL38588.1}; EC=3.6.3.54 {ECO:0000313|EMBL:KJL38588.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
carbonate dehydratase n=1 Tax=Ruania albidiflava RepID=UPI0003B67663 rbh
copper-exporting ATPase rbh
SCNpilot_cont_1000_p_scaffold_237_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16065..16895
DNA (831bp) protein (277aa)
transglutaminase n=1 Tax=Microbacterium yannicii RepID=UPI00030C5C2C rbh
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KJL38589.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transglutaminase-like enzyme, cysteine protease
SCNpilot_cont_1000_p_scaffold_237_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16938..18605
DNA (1668bp) protein (556aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
arginyl-tRNA synthetase n=1 Tax=Microbacterium yannicii RepID=UPI000309B81D rbh
SCNpilot_cont_1000_p_scaffold_237_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18613..19428
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363D442
Uncharacterized protein {ECO:0000313|EMBL:KJL38591.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_237_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19419..20963
DNA (1545bp) protein (515aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
lysA; diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E202_9MICO rbh
SCNpilot_cont_1000_p_scaffold_237_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20960..22285
DNA (1326bp) protein (442aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] rbh
homoserine dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A342D rbh
SCNpilot_cont_1000_p_scaffold_237_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22287..23375
DNA (1089bp) protein (363aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
thrC; threonine synthase; K01733 threonine synthase [EC:4.2.3.1] rbh
threonine synthase n=1 Tax=Microbacterium yannicii RepID=UPI000310550D rbh
SCNpilot_cont_1000_p_scaffold_237_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23372..24307
DNA (936bp) protein (312aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
thrB; homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] rbh
homoserine kinase n=1 Tax=Microbacterium yannicii RepID=UPI000365E4D9 rbh
SCNpilot_cont_1000_p_scaffold_237_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24428..26398
DNA (1971bp) protein (657aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003137E03 rbh
rho; transcription termination factor; K03628 transcription termination factor Rho
SCNpilot_cont_1000_p_scaffold_237_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26426..27502
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XR44_9MICO rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
prfA; protein chain release factor A; K02835 peptide chain release factor 1
SCNpilot_cont_1000_p_scaffold_237_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27625..28203)
DNA (579bp) protein (193aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
serine acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
serine O-acetyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002DF88B7 rbh
SCNpilot_cont_1000_p_scaffold_237_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28205..29143)
DNA (939bp) protein (313aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAW4_MICTS
SCNpilot_cont_1000_p_scaffold_237_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29238..30203
DNA (966bp) protein (322aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbac
hemK; methylase of polypeptide chain release factors; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000309CD6A
Displaying items 1-30 of 171 in total

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